Magnesium in PDB 1z0j: Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5

The structure of Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5, PDB code: 1z0j was solved by S.Eathiraj, X.Pan, C.Ritacco, D.G.Lambright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.32
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	45.075, 55.897, 85.960, 90.00, 90.00, 90.00
R / Rfree (%)	21.4 / 23.5

The binding sites of Magnesium atom in the Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5 (pdb code 1z0j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5, PDB code: 1z0j:

Magnesium binding site 1 out of 1 in the Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Gtp-Bound RAB22Q64L Gtpase in Complex with the Minimal Rab Binding Domain of Rabenosyn-5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg400 b:10.1 occ:1.00 O2G A:GTP500 2.0 10.9 1.0 O2B A:GTP500 2.0 9.9 1.0 OG A:SER19 2.1 10.1 1.0 O A:HOH1004 2.1 10.5 1.0 OG1 A:THR37 2.1 11.6 1.0 O A:HOH1006 2.2 10.8 1.0 CB A:SER19 3.1 10.6 1.0 CB A:THR37 3.2 11.1 1.0 PG A:GTP500 3.2 11.0 1.0 PB A:GTP500 3.3 9.9 1.0 O3B A:GTP500 3.5 8.8 1.0 N A:THR37 3.7 12.4 1.0 N A:SER19 3.9 9.2 1.0 O3G A:GTP500 4.0 11.3 1.0 OD2 A:ASP60 4.0 10.5 1.0 CA A:THR37 4.0 12.1 1.0 CA A:SER19 4.1 8.8 1.0 O2A A:GTP500 4.1 10.9 1.0 OD1 A:ASP60 4.2 10.3 1.0 O A:HOH1098 4.2 27.4 1.0 CG2 A:THR37 4.3 13.2 1.0 O1B A:GTP500 4.3 9.0 1.0 O3A A:GTP500 4.3 8.7 1.0 O1G A:GTP500 4.4 10.9 1.0 CG A:ASP60 4.5 9.2 1.0 PA A:GTP500 4.5 9.7 1.0 O1A A:GTP500 4.7 9.5 1.0 O A:THR61 4.7 11.0 1.0 O A:ASN35 4.7 14.3 1.0 C A:PRO36 4.7 13.2 1.0 CB A:LYS18 4.9 10.3 1.0 CA A:PRO36 4.9 12.9 1.0 CE A:LYS18 5.0 10.4 1.0

S.Eathiraj, X.Pan, C.Ritacco, D.G.Lambright. Structural Basis of Family-Wide Rab Gtpase Recognition By Rabenosyn-5. Nature V. 436 415 2005.
ISSN: ISSN 0028-0836
PubMed: 16034420
DOI: 10.1038/NATURE03798