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Magnesium in PDB 1zk4: Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp

Enzymatic activity of Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp

All present enzymatic activity of Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp:
1.1.1.2;

Protein crystallography data

The structure of Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp, PDB code: 1zk4 was solved by N.H.Schlieben, K.Niefind, J.Muller, B.Riebel, W.Hummel, D.Schomburg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.70 / 1.00
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 55.999, 79.946, 114.427, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 17.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp (pdb code 1zk4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp, PDB code: 1zk4:

Magnesium binding site 1 out of 1 in 1zk4

Go back to Magnesium Binding Sites List in 1zk4
Magnesium binding site 1 out of 1 in the Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of R-Specific Alcohol Dehydrogenase (Wildtype) From Lactobacillus Brevis in Complex with Acetophenone and Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1252

b:10.5
occ:0.50
 O A:HOH1272 1.9 9.1 0.5
O A:HOH1271 2.1 13.9 0.5
O A:GLN251 2.1 12.5 1.0
O A:HOH1273 2.1 12.2 1.0
C A:GLN251 3.1 11.2 1.0
OXT A:GLN251 3.4 11.8 1.0
O A:HOH1294 4.3 18.7 1.0
O A:HOH1439 4.3 22.6 1.0
O A:TYR248 4.3 11.0 1.0
CA A:GLN251 4.4 11.5 1.0
O A:THR249 4.6 13.2 1.0
CG1 A:VAL147 4.6 12.9 1.0
N A:GLN251 4.7 11.4 1.0
O A:HOH1287 4.9 13.4 1.0
C A:THR249 4.9 10.4 1.0
CG A:GLN251 5.0 13.0 1.0
CA A:THR249 5.0 10.6 1.0

Reference:

N.H.Schlieben, K.Niefind, J.Muller, B.Riebel, W.Hummel, D.Schomburg. Atomic Resolution Structures of R-Specific Alcohol Dehydrogenase From Lactobacillus Brevis Provide the Structural Bases of Its Substrate and Cosubstrate Specificity J.Mol.Biol. V. 349 801 2005.
ISSN: ISSN 0022-2836
PubMed: 15896805
DOI: 10.1016/J.JMB.2005.04.029
Page generated: Tue Aug 13 20:11:16 2024

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