Magnesium in PDB 1zno: Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1

The structure of Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1, PDB code: 1zno was solved by S.Ni, F.Forouhar, D.E.Bussiere, H.Robinson, M.A.Kennedy, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.00
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	66.611, 88.118, 118.355, 90.00, 90.00, 90.00
R / Rfree (%)	23 / 26.3

The binding sites of Magnesium atom in the Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1 (pdb code 1zno). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1, PDB code: 1zno:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg184 b:58.3 occ:0.50 O A:HIS155 2.3 19.5 1.0 ND1 A:HIS155 2.4 18.1 1.0 CG A:HIS155 3.3 14.0 1.0 C A:HIS155 3.3 16.7 1.0 CB A:HIS155 3.4 13.8 1.0 CE1 A:HIS155 3.4 15.2 1.0 CA A:HIS155 3.9 17.2 1.0 N A:HIS156 4.4 16.6 1.0 CD2 A:HIS155 4.5 16.6 1.0 NE2 A:HIS155 4.5 18.0 1.0 CA A:HIS156 4.6 16.8 1.0 O A:HOH355 4.6 17.7 1.0 C A:HIS156 5.0 18.0 1.0

Magnesium binding site 2 out of 3 in the Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg184 b:40.4 occ:0.50 O B:HIS155 2.3 18.1 1.0 ND1 B:HIS155 2.4 21.2 1.0 O B:HOH484 2.4 23.4 1.0 CE1 B:HIS155 3.3 20.5 1.0 CG B:HIS155 3.4 19.0 1.0 C B:HIS155 3.4 17.2 1.0 O B:HOH485 3.6 55.9 1.0 CB B:HIS155 3.7 16.9 1.0 O B:HOH487 3.8 72.8 1.0 CA B:HIS155 4.1 17.7 1.0 N B:HIS156 4.4 17.2 1.0 NE2 B:HIS155 4.4 20.1 1.0 CD2 B:HIS155 4.5 20.5 1.0 CA B:HIS156 4.6 18.6 1.0 O B:HOH483 4.7 57.6 1.0 O B:HOH486 4.7 22.2 1.0 C B:HIS156 4.8 18.9 1.0 CG2 B:THR158 5.0 18.5 1.0

Magnesium binding site 3 out of 3 in the Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of VC702 From Vibrio Cholerae, Northeast Structural Genomics Consortium Target: VCP1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg185 b:28.8 occ:1.00 O B:HOH349 2.2 16.7 1.0 OD1 B:ASN70 2.2 24.9 1.0 O B:HOH351 2.3 17.0 1.0 OE2 B:GLU49 2.3 25.1 1.0 O B:HOH350 2.3 18.3 1.0 O B:HOH352 2.4 23.6 1.0 CD B:GLU49 3.1 24.0 1.0 CG B:ASN70 3.2 24.4 1.0 OE1 B:GLU49 3.2 25.5 1.0 ND2 B:ASN70 3.6 22.6 1.0 O B:HOH479 4.0 55.0 1.0 O B:HOH366 4.1 20.9 1.0 O B:HOH480 4.2 19.8 1.0 O B:HOH388 4.4 37.1 1.0 O B:ASN66 4.4 19.2 1.0 NE2 B:GLN73 4.4 36.5 1.0 O B:HOH478 4.5 43.5 1.0 CG B:GLU49 4.5 25.4 1.0 CB B:ASN70 4.6 23.5 1.0 CD B:ARG69 4.7 27.6 1.0 N B:ASN70 4.8 20.9 1.0 CA B:ASN70 4.8 22.3 1.0 CG B:ARG69 5.0 25.0 1.0

S.Ni, F.Forouhar, D.E.Bussiere, H.Robinson, M.A.Kennedy. Crystal Structure of VC0702 at 2.0 A: Conserved Hypothetical Protein From Vibrio Cholerae. Proteins V. 63 733 2006.
ISSN: ISSN 0887-3585
PubMed: 16498616
DOI: 10.1002/PROT.20919