Atomistry » Magnesium » PDB 207d-2a69 » 291d
Atomistry »
  Magnesium »
    PDB 207d-2a69 »
      291d »

Magnesium in PDB 291d: Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines

Protein crystallography data

The structure of Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines, PDB code: 291d was solved by S.Portmann, K.-H.Altmann, N.Reynes, M.Egli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.880, 40.270, 66.490, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 32.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines (pdb code 291d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines, PDB code: 291d:

Magnesium binding site 1 out of 1 in 291d

Go back to Magnesium Binding Sites List in 291d
Magnesium binding site 1 out of 1 in the Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg25

b:26.4
occ:1.00
O A:HOH31 2.1 31.1 1.0
O A:HOH26 2.1 23.1 1.0
O A:HOH28 2.2 25.8 1.0
O A:HOH27 2.2 17.2 1.0
O A:HOH29 2.2 38.2 1.0
O A:HOH30 2.2 43.7 1.0
OP1 A:DA6 4.4 25.1 1.0
O A:HOH40 4.4 31.2 1.0
O A:HOH68 4.5 34.4 1.0
O2P A:T487 4.7 23.2 1.0
OP2 A:DA6 4.7 25.6 1.0
O5' A:DA6 4.8 22.4 1.0
P A:DA6 4.9 23.0 1.0

Reference:

S.Portmann, K.-H.Altmann, N.Reynes, M.Egli. Crystal Structures of Oligodeoxyribonucleotides Containing 6'-Alpha-Methyl and 6'-Alpha-Hydroxy Carbocyclic Thymidines J.Am.Chem.Soc. V. 119 2396 1997.
ISSN: ISSN 0002-7863
Page generated: Mon Dec 14 07:12:55 2020

Last articles

Zn in 7L0B
Zn in 7KZZ
Zn in 7KZL
Zn in 7L3O
Zn in 7L52
Zn in 7L6T
Zn in 7KZ7
Zn in 7L6R
Zn in 7KKM
Zn in 7KKQ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy