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Magnesium in PDB 2a33: X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210

Protein crystallography data

The structure of X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210, PDB code: 2a33 was solved by G.E.Wesenberg, G.N.Phillips Jr., J.G.Mccoy, E.Bitto, C.A.Bingman, S.T.M.Allard, Center For Eukaryotic Structural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.98 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.403, 66.773, 98.639, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 23.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210 (pdb code 2a33). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210, PDB code: 2a33:

Magnesium binding site 1 out of 1 in 2a33

Go back to Magnesium Binding Sites List in 2a33
Magnesium binding site 1 out of 1 in the X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg700

b:34.6
occ:1.00
O B:ASP139 2.0 26.8 1.0
O B:HOH818 2.1 24.9 1.0
O B:HOH816 2.1 30.8 1.0
OD2 B:ASP139 2.1 30.7 1.0
O B:HOH764 2.5 33.0 1.0
O B:HOH817 2.5 35.1 1.0
CG B:ASP139 3.0 31.9 1.0
C B:ASP139 3.1 26.8 1.0
CB B:ASP139 3.4 27.2 1.0
CA B:ASP139 3.8 26.1 1.0
OD1 B:ASP139 4.1 31.3 1.0
OE2 B:GLU190 4.1 47.9 1.0
N B:LYS140 4.2 25.7 1.0
O B:HOH704 4.2 23.8 1.0
O B:HOH718 4.3 23.7 1.0
O B:HOH758 4.3 41.0 1.0
O B:HOH752 4.3 36.0 1.0
C B:LYS140 4.4 23.1 1.0
N B:PRO141 4.5 22.6 1.0
CA B:LYS140 4.5 23.4 1.0
CD B:PRO141 4.6 22.8 1.0
CG B:PRO141 4.7 27.3 1.0
O B:LYS140 4.9 25.0 1.0

Reference:

W.B.Jeon, S.T.M.Allard, C.A.Bingman, E.Bitto, B.W.Han, G.E.Wesenberg, G.N.Phillips Jr.. X-Ray Crystal Structures of the Conserved Hypothetical Proteins From Arabidopsis Thaliana Gene Loci AT5G11950 and AT2G37210. Proteins V. 65 1051 2006.
ISSN: ISSN 0887-3585
PubMed: 17048257
DOI: 10.1002/PROT.21166
Page generated: Mon Dec 14 07:13:05 2020

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