Magnesium in the structure of X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210 (pdb 2a33)

The binding sites of Magnesium atom in the structure of X-Ray Structure of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene AT2G37210 (pdb code 2a33). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom. The 2a33 structure was solved by G.E.WESENBERG, G.N.PHILLIPS JR., J.G.MCCOY, E.BITTO, C.A.BINGMAN, S.T.M.ALLARD, CENTER FOR EUKARYOTIC STRUCTURALGENOMICS (CESG), with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 47.0-1.9 Space group P212121 a (A) 53.403 b (A) 66.773 c (A) 98.639 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 18.1 Rfree (%) 23.4 Magnesium Binding Sites: Magnesium binding site 1 out of 1 in 2a33 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 2a33. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Asp139, B: Lys140, B: Pro141, B: Glu190, B: Hoh704, B: Hoh718, B: Hoh752, B: Hoh758, B: Hoh764, B: Hoh816, B: Hoh817, B: Hoh818, conact list: Atom Atom Distance (A) Mg O B:Asp139 1.96 Mg CB B:Asp139 3.39 Mg OD2 B:Asp139 2.15 Mg C B:Asp139 3.13 Mg OD1 B:Asp139 4.12 Mg CG B:Asp139 3.04 Mg CA B:Asp139 3.83 Mg O B:Lys140 4.92 Mg N B:Lys140 4.22 Mg C B:Lys140 4.44 Mg CA B:Lys140 4.49 Mg N B:Pro141 4.45 Mg CD B:Pro141 4.57 Mg CG B:Pro141 4.68 Mg OE2 B:Glu190 4.13 Mg O B:Hoh704 4.23 Mg O B:Hoh718 4.26 Mg O B:Hoh752 4.34 Mg O B:Hoh758 4.32 Mg O B:Hoh764 2.45 Mg O B:Hoh816 2.14 Mg O B:Hoh817 2.51 Mg O B:Hoh818 2.10 interactive model: