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Magnesium in PDB 2al7: Structure of Human Adp-Ribosylation Factor-Like 10C

Protein crystallography data

The structure of Structure of Human Adp-Ribosylation Factor-Like 10C, PDB code: 2al7 was solved by S.Ismail, S.Dimov, A.Atanassova, C.Arrowsmith, A.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.59 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.732, 62.393, 63.796, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 25.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Human Adp-Ribosylation Factor-Like 10C (pdb code 2al7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Human Adp-Ribosylation Factor-Like 10C, PDB code: 2al7:

Magnesium binding site 1 out of 1 in 2al7

Go back to Magnesium Binding Sites List in 2al7
Magnesium binding site 1 out of 1 in the Structure of Human Adp-Ribosylation Factor-Like 10C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Human Adp-Ribosylation Factor-Like 10C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:22.4
occ:1.00
OG1 A:THR33 2.0 14.6 1.0
O1B A:GDP201 2.0 18.5 1.0
O A:HOH216 2.1 19.4 1.0
O A:HOH210 2.1 19.8 1.0
O A:HOH217 2.2 29.4 1.0
O A:HOH228 2.2 24.2 1.0
CB A:THR33 3.1 16.6 1.0
PB A:GDP201 3.3 19.2 1.0
O3B A:GDP201 3.6 19.0 1.0
N A:THR33 3.9 15.7 1.0
CA A:THR33 4.0 16.6 1.0
OD2 A:ASP70 4.1 17.0 1.0
O2A A:GDP201 4.1 19.8 1.0
CG2 A:THR33 4.1 18.9 1.0
O A:HOH235 4.1 30.5 1.0
OD1 A:ASP70 4.2 18.2 1.0
O3A A:GDP201 4.3 17.0 1.0
O2B A:GDP201 4.3 15.5 1.0
O A:HOH203 4.4 17.4 1.0
PA A:GDP201 4.5 19.6 1.0
O A:HOH253 4.6 38.9 1.0
CG A:ASP70 4.6 14.4 1.0
O1A A:GDP201 4.7 19.2 1.0
CE A:LYS32 4.9 17.3 1.0
CB A:LYS32 4.9 13.3 1.0
C A:LYS32 5.0 14.5 1.0

Reference:

S.Ismail, S.Dimov, A.Atanassova, C.Arrowsmith, A.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium. Gtp-Like Conformation of Gdp-Bound ARL10C Gtpase To Be Published.
Page generated: Sun Aug 10 09:48:02 2025

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