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Magnesium in PDB 2b1j: Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim

Protein crystallography data

The structure of Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim, PDB code: 2b1j was solved by C.M.Dyer, F.W.Dahlquist, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.70 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 40.040, 62.160, 54.223, 90.00, 96.77, 90.00
R / Rfree (%) 18.1 / 24

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim (pdb code 2b1j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim, PDB code: 2b1j:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2b1j

Go back to Magnesium Binding Sites List in 2b1j
Magnesium binding site 1 out of 2 in the Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:29.8
occ:1.00
OD2 A:ASP57 1.9 30.4 1.0
OD1 A:ASP13 2.0 32.4 1.0
O A:HOH204 2.1 31.8 1.0
O A:ASN59 2.1 28.1 1.0
O A:HOH203 2.1 30.4 1.0
O A:HOH202 2.2 24.7 1.0
CG A:ASP57 3.0 30.5 1.0
CG A:ASP13 3.0 27.6 1.0
C A:ASN59 3.3 32.1 1.0
OD2 A:ASP13 3.4 39.0 1.0
OD1 A:ASP57 3.5 36.1 1.0
OD1 A:ASP12 3.9 26.1 1.0
CA A:ASN59 4.1 35.3 1.0
CB A:ASN59 4.1 48.3 1.0
CE1 A:PHE14 4.3 38.9 0.5
CB A:ASP57 4.3 31.8 1.0
CD1 A:PHE14 4.3 37.3 0.5
CG A:MET60 4.3 29.4 1.0
N A:ASN59 4.3 36.3 1.0
N A:MET60 4.4 31.4 1.0
N A:ASP13 4.4 22.4 1.0
CB A:ASP13 4.4 24.8 1.0
CG A:ASP12 4.5 29.8 1.0
CA A:MET60 4.6 33.0 1.0
OD2 A:ASP12 4.7 25.9 1.0
CZ A:PHE14 4.7 26.9 0.5
O A:HOH240 4.8 59.0 1.0
CG A:PHE14 4.8 33.6 0.5
CA A:ASP13 4.9 26.9 1.0
NZ A:LYS109 5.0 36.3 1.0

Magnesium binding site 2 out of 2 in 2b1j

Go back to Magnesium Binding Sites List in 2b1j
Magnesium binding site 2 out of 2 in the Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Unphosphorylated Chey Bound to the N- Terminus of Flim within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:28.8
occ:1.00
OD2 B:ASP57 1.9 30.4 1.0
OD1 B:ASP13 2.0 30.9 1.0
O B:ASN59 2.0 29.9 1.0
O B:HOH204 2.0 24.6 1.0
O B:HOH206 2.2 31.2 1.0
O B:HOH203 2.2 16.7 1.0
CG B:ASP13 3.0 24.6 1.0
CG B:ASP57 3.1 22.5 1.0
C B:ASN59 3.2 26.8 1.0
OD2 B:ASP13 3.4 24.5 1.0
OD1 B:ASP57 3.6 33.8 1.0
OD1 B:ASP12 4.0 21.3 1.0
CA B:ASN59 4.0 27.8 1.0
CB B:ASN59 4.1 36.6 1.0
CG B:MET60 4.2 31.4 1.0
N B:MET60 4.2 25.5 1.0
CE1 B:PHE14 4.2 39.1 0.7
CB B:ASP57 4.2 17.4 1.0
N B:ASP13 4.3 23.2 1.0
N B:ASN59 4.3 25.1 1.0
CB B:ASP13 4.4 27.1 1.0
CD1 B:PHE14 4.4 43.2 0.7
CA B:MET60 4.4 28.3 1.0
CG B:ASP12 4.6 24.3 1.0
OD2 B:ASP12 4.7 22.5 1.0
O B:HOH209 4.8 38.7 1.0
CA B:ASP13 4.8 24.9 1.0
CB B:MET60 4.8 34.1 1.0
CD2 B:PHE14 4.9 38.9 0.3

Reference:

C.M.Dyer, F.W.Dahlquist. Switched or Not?: the Structure of Unphosphorylated Chey Bound to the N Terminus of Flim. J.Bacteriol. V. 188 7354 2006.
ISSN: ISSN 0021-9193
PubMed: 17050923
DOI: 10.1128/JB.00637-06
Page generated: Tue Aug 13 21:39:21 2024

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