Magnesium in PDB 2bbo: Human NBD1 with PHE508

The structure of Human NBD1 with PHE508, PDB code: 2bbo was solved by H.A.Lewis, M.C.Kearins, K.Conners, X.Zhao, F.Lu, J.M.Sauder, S.Emtage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.80 / 2.55
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	57.836, 57.836, 141.303, 90.00, 90.00, 90.00
R / Rfree (%)	23 / 27.4

The binding sites of Magnesium atom in the Human NBD1 with PHE508 (pdb code 2bbo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human NBD1 with PHE508, PDB code: 2bbo:

Magnesium binding site 1 out of 1 in the Human NBD1 with PHE508


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human NBD1 with PHE508 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2 b:31.1 occ:1.00 OG1 A:THR465 2.0 37.3 1.0 OE1 A:GLN493 2.0 38.4 1.0 O2G A:ATP1 2.2 40.2 1.0 O2B A:ATP1 2.2 40.3 1.0 O A:HOH23 2.4 28.4 1.0 CD A:GLN493 3.1 39.2 1.0 CB A:THR465 3.3 36.7 1.0 PG A:ATP1 3.4 40.6 1.0 PB A:ATP1 3.5 40.9 1.0 OH A:TYR577 3.6 53.1 1.0 OD2 A:ASP572 3.6 45.5 1.0 NE2 A:GLN493 3.7 38.5 1.0 O3B A:ATP1 3.8 40.5 1.0 N A:THR465 3.9 36.5 1.0 OD1 A:ASP572 3.9 45.4 1.0 O1G A:ATP1 4.0 41.5 1.0 CA A:THR465 4.1 36.9 1.0 CG A:ASP572 4.2 44.9 1.0 O1A A:ATP1 4.2 46.2 1.0 CG A:GLN493 4.3 39.0 1.0 CG2 A:THR465 4.3 36.5 1.0 CZ A:TYR577 4.4 53.0 1.0 O1B A:ATP1 4.5 41.2 1.0 O3A A:ATP1 4.6 43.9 1.0 O3G A:ATP1 4.7 40.8 1.0 CE2 A:TYR577 4.8 52.8 1.0 PA A:ATP1 4.8 46.8 1.0 CB A:LYS464 4.9 36.2 1.0 CB A:GLN493 4.9 38.8 1.0 C A:LYS464 4.9 36.5 1.0

H.A.Lewis, C.Wang, X.Zhao, Y.Hamuro, K.Conners, M.C.Kearins, F.Lu, J.M.Sauder, K.S.Molnar, S.J.Coales, P.C.Maloney, W.B.Guggino, D.R.Wetmore, P.C.Weber, J.F.Hunt. Structure and Dynamics of NBD1 From Cftr Characterized Using Crystallography and Hydrogen/Deuterium Exchange Mass Spectrometry. J.Mol.Biol. V. 396 406 2010.
ISSN: ISSN 0022-2836
PubMed: 19944699
DOI: 10.1016/J.JMB.2009.11.051