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Magnesium in PDB 2bej: Structure of the Bacterial Chromosome Segregation Protein Soj

Protein crystallography data

The structure of Structure of the Bacterial Chromosome Segregation Protein Soj, PDB code: 2bej was solved by T.A.Leonard, P.J.G.Butler, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 61.361, 61.361, 126.648, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 26.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Bacterial Chromosome Segregation Protein Soj (pdb code 2bej). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Bacterial Chromosome Segregation Protein Soj, PDB code: 2bej:

Magnesium binding site 1 out of 1 in 2bej

Go back to Magnesium Binding Sites List in 2bej
Magnesium binding site 1 out of 1 in the Structure of the Bacterial Chromosome Segregation Protein Soj


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Bacterial Chromosome Segregation Protein Soj within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:34.9
occ:1.00
O A:HOH2038 1.9 36.4 1.0
O A:HOH2095 2.0 27.9 1.0
OG1 A:THR21 2.0 42.7 1.0
O1B A:ADP500 2.2 35.4 1.0
O A:HOH2093 2.3 31.9 1.0
O A:HOH2015 2.4 42.0 1.0
CB A:THR21 3.2 43.2 1.0
PB A:ADP500 3.4 36.4 1.0
N A:THR21 3.7 44.6 1.0
O3B A:ADP500 3.8 38.0 1.0
OD2 A:ASP118 3.9 43.6 1.0
OD1 A:ASP118 3.9 44.7 1.0
CA A:THR21 3.9 43.5 1.0
O1A A:ADP500 4.1 38.6 1.0
OD2 A:ASP44 4.1 49.8 1.0
O A:HOH2013 4.2 37.8 1.0
CG A:ASP118 4.3 45.1 1.0
CB A:LYS20 4.3 45.8 1.0
O2B A:ADP500 4.3 35.5 1.0
CG2 A:THR21 4.4 41.8 1.0
O A:HOH2016 4.4 45.4 1.0
O A:ALA119 4.4 47.6 1.0
OD1 A:ASN48 4.4 49.5 1.0
CE A:LYS20 4.5 47.8 1.0
O3A A:ADP500 4.6 37.1 1.0
CB A:ASN48 4.6 48.6 1.0
C A:LYS20 4.7 44.9 1.0
PA A:ADP500 4.8 37.7 1.0

Reference:

T.A.Leonard, P.J.G.Butler, J.Lowe. Bacterial Chromosome Segregation: Structure and Dna Binding of the Soj Dimer--A Conserved Biological Switch Embo J. V. 24 270 2005.
ISSN: ISSN 0261-4189
PubMed: 15635448
DOI: 10.1038/SJ.EMBOJ.7600530
Page generated: Tue Aug 13 21:50:29 2024

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