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Magnesium in PDB 2c47: Structure of Casein Kinase 1 Gamma 2

Protein crystallography data

The structure of Structure of Casein Kinase 1 Gamma 2, PDB code: 2c47 was solved by G.Bunkoczi, P.Rellos, S.Das, E.Ugochukwu, O.Fedorov, F.Sobott, J.Eswaran, A.Amos, L.Ball, F.Von Delft, A.Bullock, J.Debreczeni, A.Turnbull, M.Sundstrom, J.Weigelt, C.Arrowsmith, A.Edwards, S.Knapp, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 93.959, 97.088, 185.914, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.7

Other elements in 2c47:

The structure of Structure of Casein Kinase 1 Gamma 2 also contains other interesting chemical elements:

Iodine (I) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Casein Kinase 1 Gamma 2 (pdb code 2c47). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Casein Kinase 1 Gamma 2, PDB code: 2c47:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2c47

Go back to Magnesium Binding Sites List in 2c47
Magnesium binding site 1 out of 2 in the Structure of Casein Kinase 1 Gamma 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Casein Kinase 1 Gamma 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1301

b:32.2
occ:1.00
O A:HOH2021 2.8 33.2 1.0
O B:HOH2056 3.1 47.4 1.0
N B:LYS261 3.4 55.3 1.0
O A:HOH2023 3.5 48.9 1.0
N A:LYS113 3.6 60.0 1.0
N B:LEU260 3.6 58.7 1.0
CB B:THR259 3.9 57.1 1.0
CB B:LEU260 3.9 59.5 1.0
CA B:LEU260 4.1 60.7 1.0
CE2 A:TYR114 4.1 53.0 1.0
CB B:LYS261 4.1 59.2 1.0
CA A:GLY112 4.1 57.7 1.0
CD2 A:TYR114 4.1 47.6 1.0
CB A:LYS113 4.2 58.2 1.0
C B:LEU260 4.2 59.3 1.0
CG A:LYS113 4.3 53.5 1.0
OG1 B:THR259 4.3 59.8 1.0
CA B:LYS261 4.4 55.6 1.0
C A:GLY112 4.4 59.8 1.0
O A:CSD111 4.4 34.6 1.0
CA A:LYS113 4.5 61.0 1.0
C B:THR259 4.5 58.3 1.0
CA B:THR259 4.7 58.8 1.0
CG2 B:THR259 4.7 54.9 1.0
CG B:LEU260 4.7 61.5 1.0

Magnesium binding site 2 out of 2 in 2c47

Go back to Magnesium Binding Sites List in 2c47
Magnesium binding site 2 out of 2 in the Structure of Casein Kinase 1 Gamma 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Casein Kinase 1 Gamma 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1301

b:33.9
occ:1.00
O C:HOH2028 2.2 52.2 1.0
O C:ARG295 4.2 60.9 1.0
OD1 C:ASP298 4.2 55.1 1.0
O C:ARG296 4.3 60.8 1.0
O C:LEU297 4.4 57.0 1.0
C C:ARG296 4.6 50.6 1.0
NH1 C:ARG232 4.6 52.0 1.0
CA C:ARG296 4.7 49.0 1.0
ND2 C:ASN222 4.8 55.2 1.0

Reference:

G.Bunkoczi, P.Rellos, S.Das, E.Ugochukwu, O.Fedorov, F.Sobott, J.Eswaran, A.Amos, L.Ball, F.Von Delft, A.Bullock, J.Debreczeni, A.Turnbull, M.Sundstrom, J.Weigelt, C.Arrowsmith, A.Edwards, S.Knapp. The Structure of Casein Kinase 1 Gamma 2 To Be Published.
Page generated: Mon Dec 14 07:18:24 2020

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