Magnesium in PDB 2cfr: Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase

All present enzymatic activity of Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase:
3.1.3.74;

The structure of Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase, PDB code: 2cfr was solved by B.S.Kang, H.J.Cho, K.J.Kim, O.S.Kwon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.06 / 2.4
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	54.300, 54.300, 213.900, 90.00, 90.00, 90.00
R / Rfree (%)	20.3 / 25.7

The binding sites of Magnesium atom in the Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase (pdb code 2cfr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase, PDB code: 2cfr:

Magnesium binding site 1 out of 1 in the Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1297 b:21.1 occ:1.00 OD2 A:ASP25 2.1 12.1 1.0 OD1 A:ASP238 2.2 16.3 1.0 O A:ASP27 2.4 12.7 1.0 CG A:ASP25 2.9 13.6 1.0 OD1 A:ASP25 3.0 15.4 1.0 CG A:ASP238 3.3 17.9 1.0 C A:ASP27 3.5 13.5 1.0 OD2 A:ASP238 3.7 19.0 1.0 OD2 A:ASP243 4.1 16.6 1.0 CB A:ASP25 4.2 14.7 1.0 N A:ASP27 4.3 15.1 1.0 CA A:ASP27 4.3 14.2 1.0 CB A:ASP27 4.4 14.3 1.0 N A:GLY28 4.6 13.7 1.0 CG2 A:VAL29 4.6 11.6 1.0 O A:HOH2019 4.6 11.9 1.0 CB A:ASP238 4.6 18.3 1.0 N A:ASP238 4.7 18.3 1.0 CA A:GLY28 4.8 13.6 1.0 N A:CYS26 4.9 14.8 1.0 OD1 A:ASP243 4.9 20.1 1.0 CG A:ARG239 4.9 23.6 1.0 CG A:ASP243 4.9 18.8 1.0 C A:CYS26 4.9 15.0 1.0

B.S.Kang, H.J.Cho, K.J.Kim, O.S.Kwon. Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase To Be Published.