Magnesium in PDB 2d25: C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G

The structure of C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G, PDB code: 2d25 was solved by U.Heinemann, M.Hahn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.75
Space group	P 6
Cell size a, b, c (Å), α, β, γ (°)	53.770, 53.770, 34.350, 90.00, 90.00, 120.00
R / Rfree (%)	n/a / n/a

The binding sites of Magnesium atom in the C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G (pdb code 2d25). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G, PDB code: 2d25:

Magnesium binding site 1 out of 1 in the C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of C-C-A-G-G-C-M5C-T-G-G; Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg21 b:56.1 occ:1.00 O A:HOH103 2.0 53.0 1.0 O A:HOH102 2.0 55.4 1.0 O A:HOH105 2.0 54.5 1.0 O A:HOH104 2.0 53.9 1.0 O A:HOH106 2.0 49.3 1.0 N7 A:DA3 4.1 17.7 1.0 O6 A:DG4 4.2 8.0 1.0 O A:HOH26 4.3 17.2 1.0 N7 A:DG4 4.3 11.5 1.0 C8 A:DA3 4.4 15.9 1.0 OP2 A:DA3 4.9 32.3 1.0 C6 A:DG4 4.9 10.5 1.0

U.Heinemann, M.Hahn. C-C-A-G-G-C-M5C-T-G-G. Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G. J.Biol.Chem. V. 267 7332 1992.
ISSN: ISSN 0021-9258
PubMed: 1559976