Magnesium in PDB 2dsy: Crystal Structure of TTHA0281 From Thermus Thermophilus HB8

The structure of Crystal Structure of TTHA0281 From Thermus Thermophilus HB8, PDB code: 2dsy was solved by N.Okazaki, M.Kumei, A.Shinkai, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	38.996, 62.743, 65.724, 90.00, 104.31, 90.00
R / Rfree (%)	18.3 / 23.2

The binding sites of Magnesium atom in the Crystal Structure of TTHA0281 From Thermus Thermophilus HB8 (pdb code 2dsy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of TTHA0281 From Thermus Thermophilus HB8, PDB code: 2dsy:

Magnesium binding site 1 out of 1 in the Crystal Structure of TTHA0281 From Thermus Thermophilus HB8


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of TTHA0281 From Thermus Thermophilus HB8 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2001 b:35.3 occ:1.00 O B:HOH2038 1.9 38.4 1.0 OE1 B:GLU26 1.9 31.9 1.0 O B:HOH2037 1.9 31.3 1.0 O B:HOH2029 2.1 32.4 1.0 OD1 B:ASP25 2.4 25.5 1.0 CD B:GLU26 2.9 35.1 1.0 CG B:ASP25 3.4 21.6 1.0 OE2 B:GLU26 3.5 37.6 1.0 OD2 B:ASP25 3.7 24.0 1.0 O B:HOH2008 4.0 31.3 1.0 CG B:GLU26 4.0 29.7 1.0 O B:HOH2013 4.1 33.8 1.0 CB B:ASP25 4.6 20.1 1.0 N B:GLU26 4.6 20.8 1.0 CA B:ASP25 4.8 19.8 1.0

N.Okazaki, M.Kumei, M.Manzoku, S.Kuramitsu, M.Shirouzu, A.Shinkai, S.Yokoyama. Structure of A UPF0150-Family Protein From Thermus Thermophilus HB8 Acta Crystallogr.,Sect.F V. 63 173 2007.
ISSN: ESSN 1744-3091
PubMed: 17329807
DOI: 10.1107/S1744309107006070