Magnesium in PDB 2dwp: A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb

All present enzymatic activity of A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb:
2.7.1.105; 3.1.3.46;

The structure of A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb, PDB code: 2dwp was solved by Y.H.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.70
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	101.990, 101.990, 258.070, 90.00, 90.00, 120.00
R / Rfree (%)	22.4 / 26.4

The binding sites of Magnesium atom in the A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb (pdb code 2dwp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb, PDB code: 2dwp:

Magnesium binding site 1 out of 1 in the A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Pseudo Substrate Complex of 6-Phosphofructo-2-Kinase of Pfkfb within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg701 b:53.1 occ:1.00 OG1 A:THR48 2.2 47.7 1.0 O2G A:ACP700 2.3 53.1 1.0 O2B A:ACP700 2.6 53.1 1.0 O A:HOH913 2.9 53.1 1.0 O A:HOH743 3.1 53.1 1.0 CB A:THR48 3.2 47.7 1.0 PG A:ACP700 3.4 53.1 1.0 PB A:ACP700 3.6 53.1 1.0 C3B A:ACP700 3.7 53.1 1.0 OD2 A:ASP124 3.8 46.0 1.0 O3G A:ACP700 3.9 53.1 1.0 OD1 A:ASN69 3.9 39.9 1.0 O2A A:ACP700 4.1 53.1 1.0 O A:HOH804 4.1 53.1 1.0 NZ A:LYS168 4.1 62.8 1.0 O2 A:F6P702 4.1 53.1 1.0 N A:THR48 4.2 41.5 1.0 CG2 A:THR48 4.2 47.7 1.0 CA A:THR48 4.2 41.5 1.0 O3A A:ACP700 4.5 53.1 1.0 OD1 A:ASP124 4.5 46.0 1.0 CG A:ASP124 4.5 46.0 1.0 O A:HOH949 4.6 53.1 1.0 PA A:ACP700 4.6 53.1 1.0 O1G A:ACP700 4.7 53.1 1.0 O1A A:ACP700 4.7 53.1 1.0 O1B A:ACP700 4.9 53.1 1.0 O A:HOH769 4.9 53.1 1.0 CG A:ASN69 5.0 39.9 1.0

S.G.Kim, M.Cavalier, M.R.El-Maghrabi, Y.H.Lee. A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-Kinase/Fructose-2,6- Bisphosphatase J.Mol.Biol. V. 370 14 2007.
ISSN: ISSN 0022-2836
PubMed: 17499765
DOI: 10.1016/J.JMB.2007.03.038