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Magnesium in PDB 2e7x: Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand

Protein crystallography data

The structure of Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand, PDB code: 2e7x was solved by T.S.Kumarevel, P.Karthe, N.Nakano, A.Shinkai, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.84 / 1.80
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 103.846, 103.846, 73.992, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 21.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand (pdb code 2e7x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand, PDB code: 2e7x:

Magnesium binding site 1 out of 1 in 2e7x

Go back to Magnesium Binding Sites List in 2e7x
Magnesium binding site 1 out of 1 in the Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Lrp/Asnc Like Transcriptional Regulator From Sulfolobus Tokodaii 7 Complexed with Its Cognate Ligand within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1001

b:64.2
occ:1.00
CB A:TYR51 3.7 29.0 1.0
CD1 A:TYR51 3.8 34.5 1.0
CG A:TYR51 4.2 33.8 1.0
O A:TYR51 4.8 26.4 1.0
CA A:TYR51 4.8 27.4 1.0
C A:TYR51 4.8 27.2 1.0
CB A:ASN146 4.9 21.8 1.0
O A:ALA52 4.9 27.4 1.0
CE1 A:TYR51 4.9 36.2 1.0

Reference:

T.S.Kumarevel, N.Nakano, K.Ponnuraj, S.C.Gopinath, K.Sakamoto, A.Shinkai, P.K.Kumar, S.Yokoyama. Crystal Structure of Glutamine Receptor Protein From Sulfolobus Tokodaii Strain 7 in Complex with Its Effector L-Glutamine: Implications of Effector Binding in Molecular Association and Dna Binding. Nucleic Acids Res. V. 36 4808 2008.
ISSN: ISSN 0305-1048
PubMed: 18653535
DOI: 10.1093/NAR/GKN456
Page generated: Mon Dec 14 07:21:08 2020

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