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Magnesium in PDB 2ef0: Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus

Enzymatic activity of Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus

All present enzymatic activity of Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus:
2.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus, PDB code: 2ef0 was solved by P.Karthe, T.S.Kumarevel, S.Kuramitsu, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.78 / 2.00
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 77.385, 77.385, 79.132, 90.00, 90.00, 120.00
R / Rfree (%) 20 / 23.6

Other elements in 2ef0:

The structure of Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus (pdb code 2ef0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus, PDB code: 2ef0:

Magnesium binding site 1 out of 1 in 2ef0

Go back to Magnesium Binding Sites List in 2ef0
Magnesium binding site 1 out of 1 in the Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:12.9
occ:0.50
NH2 A:ARG60 3.4 18.7 1.0
NH1 A:ARG60 3.6 16.6 1.0
CZ A:ARG60 4.0 19.3 1.0
CD2 A:TYR76 4.6 26.0 1.0

Reference:

P.Karthe, T.S.Kumarevel, S.Kuramitsu, S.Yokoyama. Crystal Structure of Ornithine Carbamoyltransferase From Thermus Thermophilus To Be Published.
Page generated: Tue Aug 13 22:44:57 2024

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