The binding sites of Magnesium atom in the structure of Anaerobic Crystal Strucutre Analysis Of the 1,2-Dihydroxynaphthalene Dioxygeanse of Pseudomonas Sp. Strain C18 Complexes to 1,2- Dihydroxynaphthalene (pdb code 2ei1). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom. The 2ei1 structure was solved by D.B.NEAU, M.S.KELKER, C.L.COLBERT, J.T.BOLIN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A) | 50.0-1.5 | Space group | I422 | a (A) | 117.848 | b (A) | 117.848 | c (A) | 120.965 | alpha (°) | 90.00 | beta (°) | 90.00 | gamma (°) | 90.00 | Rfactor (%) | 17.1 | Rfree (%) | 18 |
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Magnesium binding site 1 out of 1 in 2ei1
|  Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 2ei1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Glu177, A: Phe192, A: His194, A: Asp199, A: Ile275, A: Hoh1639, A: Hoh1640, A: Hoh1641, A: Hoh1642, A: Hoh1643, A: Hoh1668, A: Hoh1673, A: Hoh1763, A: Hoh1809, | conact list:
Atom | Atom | Distance (A) | Mg | OE1 A:Glu177 | 3.33 | Mg | OE2 A:Glu177 | 2.03 | Mg | CD A:Glu177 | 3.01 | Mg | CG A:Glu177 | 4.35 | Mg | O A:Phe192 | 4.32 | Mg | CB A:Phe192 | 4.71 | Mg | ND1 A:His194 | 4.09 | Mg | CE1 A:His194 | 4.58 | Mg | O A:Asp199 | 3.80 | Mg | OD2 A:Asp199 | 4.24 | Mg | C A:Asp199 | 4.83 | Mg | OD1 A:Asp199 | 4.00 | Mg | CG A:Asp199 | 4.40 | Mg | O A:Ile275 | 4.33 | Mg | N A:Ile275 | 5.00 | Mg | O A:Hoh1639 | 2.05 | Mg | O A:Hoh1640 | 2.09 | Mg | O A:Hoh1641 | 2.09 | Mg | O A:Hoh1642 | 2.14 | Mg | O A:Hoh1643 | 2.06 | Mg | O A:Hoh1668 | 4.08 | Mg | O A:Hoh1673 | 4.02 | Mg | O A:Hoh1763 | 4.32 | Mg | O A:Hoh1809 | 4.63 |
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