Magnesium »
PDB 2ejq-2f6w »
2ez9 »
Magnesium in PDB 2ez9: Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate
Enzymatic activity of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate
All present enzymatic activity of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate:
1.2.3.3;
1.2.3.3;
Protein crystallography data
The structure of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate, PDB code: 2ez9
was solved by
G.Wille,
D.Meyer,
A.Steinmetz,
E.Hinze,
R.Golbik,
K.Tittmann,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.62 / 1.60 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 118.661, 154.517, 165.640, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 15.8 / 18 |
Other elements in 2ez9:
The structure of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate also contains other interesting chemical elements:
| Sodium | (Na) | 2 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate
(pdb code 2ez9). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate, PDB code: 2ez9:
Jump to Magnesium binding site number: 1; 2;
In total 2 binding sites of Magnesium where determined in the Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate, PDB code: 2ez9:
Jump to Magnesium binding site number: 1; 2;
Magnesium binding site 1 out of 2 in 2ez9
Go back to
Magnesium Binding Sites List in 2ez9
Magnesium binding site 1 out
of 2 in the Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate within 5.0Å range:
|
Magnesium binding site 2 out of 2 in 2ez9
Go back to
Magnesium Binding Sites List in 2ez9
Magnesium binding site 2 out
of 2 in the Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Pyruvate Oxidase Variant F479W in Complex with Reaction Intermediate Analogue 2-Phosphonolactyl-Thiamin Diphosphate within 5.0Å range:
|
Reference:
G.Wille,
D.Meyer,
A.Steinmetz,
E.Hinze,
R.Golbik,
K.Tittmann.
The Catalytic Cycle of A Thiamin Diphosphate Enzyme Examined By Cryocrystallography. Nat.Chem.Biol. V. 2 324 2006.
ISSN: ISSN 1552-4450
PubMed: 16680160
DOI: 10.1038/NCHEMBIO788
Page generated: Tue Aug 13 22:50:37 2024
ISSN: ISSN 1552-4450
PubMed: 16680160
DOI: 10.1038/NCHEMBIO788
Last articles
Zn in 9JYWZn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
