Magnesium in PDB 2f00: Escherichia Coli Murc

All present enzymatic activity of Escherichia Coli Murc:
6.3.2.8;

The structure of Escherichia Coli Murc, PDB code: 2f00 was solved by T.Deva, E.N.Baker, C.J.Squire, C.A.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.00 / 2.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	73.926, 93.134, 176.792, 90.00, 90.00, 90.00
R / Rfree (%)	21.7 / 26

The binding sites of Magnesium atom in the Escherichia Coli Murc (pdb code 2f00). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Escherichia Coli Murc, PDB code: 2f00:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Escherichia Coli Murc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Murc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:48.6 occ:0.00 O A:HOH1037 2.0 48.1 0.0 O A:HOH1034 2.1 46.4 0.0 NE2 A:HIS199 2.1 63.1 1.0 O A:HOH1035 2.1 48.5 0.0 O A:HOH1033 2.1 47.4 0.0 O A:HOH1036 2.1 46.6 0.0 CE1 A:HIS199 2.9 62.7 1.0 CD2 A:HIS199 3.2 62.3 1.0 OE2 A:GLU177 4.1 36.3 1.0 ND1 A:HIS199 4.1 62.2 1.0 O A:THR127 4.1 30.0 1.0 O A:HOH946 4.2 48.0 1.0 CG A:HIS199 4.3 61.9 1.0 NZ A:LYS130 4.3 27.9 1.0 NE2 A:HIS354 4.5 59.0 1.0 OD2 A:ASP198 4.8 57.7 1.0 CE1 A:HIS354 4.9 59.0 1.0 CB A:SER178 4.9 38.6 1.0 CD A:GLU177 4.9 37.3 1.0

Magnesium binding site 2 out of 2 in the Escherichia Coli Murc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Escherichia Coli Murc within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg901 b:44.5 occ:0.00 O B:HOH1143 1.9 42.6 0.0 O B:HOH1140 1.9 45.6 0.0 O B:HOH1144 2.0 44.1 0.0 O B:HOH1142 2.0 42.9 0.0 O B:HOH1141 2.0 44.6 0.0 NE2 B:HIS199 2.1 39.3 1.0 CE1 B:HIS199 2.9 39.5 1.0 CD2 B:HIS199 3.2 39.3 1.0 O B:HOH1073 3.7 41.1 1.0 NE2 B:HIS354 4.0 36.2 1.0 O B:THR127 4.1 21.3 1.0 ND1 B:HIS199 4.1 39.9 1.0 OD2 B:ASP198 4.1 39.2 1.0 OE2 B:GLU177 4.3 28.1 1.0 CG B:HIS199 4.3 40.4 1.0 NZ B:LYS130 4.5 19.9 1.0 CE1 B:HIS354 4.6 36.0 1.0 CB B:SER178 4.6 26.8 1.0

T.Deva, E.N.Baker, C.J.Squire, C.A.Smith. Structure of Escherichia Coliudp-N-Acetylmuramoyl:L-Alanine Ligase (Murc). Acta Crystallogr.,Sect.D V. 62 1466 2006.
ISSN: ISSN 0907-4449
PubMed: 17139082
DOI: 10.1107/S0907444906038376