Magnesium in PDB 2fka: Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5)

The structure of Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5), PDB code: 2fka was solved by J.Guhaniyogi, V.L.Robinson, A.M.Stock, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.96 / 2.00
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	198.730, 198.730, 198.730, 90.00, 90.00, 90.00
R / Rfree (%)	21 / 22.4

The structure of Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5) also contains other interesting chemical elements:

Fluorine

(F)

3 atoms

The binding sites of Magnesium atom in the Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5) (pdb code 2fka). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5), PDB code: 2fka:

Magnesium binding site 1 out of 1 in the Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Mg(2+) and Bef(3)(-)-Bound Chey in Complex with Chez(200-214) Solved From A F432 Crystal Grown in Caps (pH 10.5) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg9001 b:12.5 occ:1.00 OD2 A:ASP57 2.1 31.0 1.0 O A:HOH9070 2.1 37.0 1.0 F1 A:BEF146 2.2 35.8 1.0 O A:HOH9071 2.2 30.4 1.0 O A:ASN59 2.2 28.2 1.0 OD1 A:ASP13 2.3 30.3 1.0 CG A:ASP57 3.2 24.0 1.0 CG A:ASP13 3.3 29.1 1.0 BE A:BEF146 3.3 35.9 1.0 C A:ASN59 3.4 28.2 1.0 OD2 A:ASP13 3.6 31.8 1.0 OD1 A:ASP57 3.6 23.4 1.0 OD1 A:ASP12 3.8 27.3 1.0 CE1 A:PHE14 3.9 41.1 1.0 CD1 A:PHE14 3.9 39.0 1.0 CA A:ASN59 4.2 28.7 1.0 F3 A:BEF146 4.2 32.5 1.0 CG A:MET60 4.3 26.6 1.0 CB A:ASN59 4.3 30.2 1.0 N A:ASN59 4.4 27.7 1.0 CB A:ASP57 4.4 21.5 1.0 F2 A:BEF146 4.4 35.6 1.0 N A:MET60 4.5 27.4 1.0 N A:ASP13 4.5 25.3 1.0 CG A:ASP12 4.6 24.3 1.0 CB A:ASP13 4.6 27.2 1.0 CA A:MET60 4.7 27.2 1.0 OD2 A:ASP12 4.8 27.8 1.0 NZ A:LYS109 4.8 36.7 1.0

J.Guhaniyogi, V.L.Robinson, A.M.Stock. Crystal Structures of Beryllium Fluoride-Free and Beryllium Fluoride-Bound Chey in Complex with the Conserved C-Terminal Peptide of Chez Reveal Dual Binding Modes Specific to Chey Conformation. J.Mol.Biol. V. 359 624 2006.
ISSN: ISSN 0022-2836
PubMed: 16674976
DOI: 10.1016/J.JMB.2006.03.050