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Magnesium in PDB 2fol: Crystal Structure of Human RAB1A in Complex with Gdp

Protein crystallography data

The structure of Crystal Structure of Human RAB1A in Complex with Gdp, PDB code: 2fol was solved by J.Wang, W.Tempel, Y.Shen, L.Shen, C.Arrowsmith, A.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.63
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 75.790, 75.790, 49.080, 90.00, 90.00, 120.00
R / Rfree (%) 19.9 / 25.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Human RAB1A in Complex with Gdp (pdb code 2fol). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human RAB1A in Complex with Gdp, PDB code: 2fol:

Magnesium binding site 1 out of 1 in 2fol

Go back to Magnesium Binding Sites List in 2fol
Magnesium binding site 1 out of 1 in the Crystal Structure of Human RAB1A in Complex with Gdp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human RAB1A in Complex with Gdp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:44.4
occ:1.00
O A:HOH301 1.9 44.6 1.0
O A:HOH302 2.1 39.1 1.0
OG A:SER22 2.2 43.4 1.0
O3B A:GDP201 2.2 59.5 1.0
O A:HOH306 2.3 43.6 1.0
O1B A:GDP201 2.7 61.5 1.0
PB A:GDP201 3.0 58.6 1.0
CB A:SER22 3.2 42.4 1.0
O1A A:GDP201 3.3 55.5 1.0
O3A A:GDP201 4.0 57.0 1.0
PA A:GDP201 4.0 55.7 1.0
O A:ILE38 4.1 43.3 1.0
N A:SER22 4.1 41.8 1.0
OD2 A:ASP63 4.2 45.4 1.0
O2A A:GDP201 4.2 57.8 1.0
O2B A:GDP201 4.3 56.3 1.0
CA A:SER22 4.3 42.2 1.0
OD1 A:ASP63 4.4 47.1 1.0
CG2 A:ILE38 4.7 43.8 1.0
CG A:ASP63 4.7 45.4 1.0
CE A:LYS21 4.9 39.4 1.0

Reference:

J.Wang, W.Tempel, Y.Shen, L.Shen, C.Arrowsmith, A.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium (Sgc). Crystal Structure of Human RAB1A in Complex with Gdp To Be Published.
Page generated: Mon Dec 14 07:23:22 2020

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