Atomistry » Magnesium » PDB 2fl6-2fwq » 2fuv
Atomistry »
  Magnesium »
    PDB 2fl6-2fwq »
      2fuv »

Magnesium in PDB 2fuv: Phosphoglucomutase From Salmonella Typhimurium.

Enzymatic activity of Phosphoglucomutase From Salmonella Typhimurium.

All present enzymatic activity of Phosphoglucomutase From Salmonella Typhimurium.:
5.4.2.2;

Protein crystallography data

The structure of Phosphoglucomutase From Salmonella Typhimurium., PDB code: 2fuv was solved by J.Osipiuk, R.Wu, D.Holzle, F.Collart, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.33 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.658, 104.864, 125.955, 90.00, 90.00, 90.00
R / Rfree (%) 14.9 / 20

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Phosphoglucomutase From Salmonella Typhimurium. (pdb code 2fuv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Phosphoglucomutase From Salmonella Typhimurium., PDB code: 2fuv:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 2fuv

Go back to Magnesium Binding Sites List in 2fuv
Magnesium binding site 1 out of 3 in the Phosphoglucomutase From Salmonella Typhimurium.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Phosphoglucomutase From Salmonella Typhimurium. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg901

b:15.2
occ:1.00
OG A:SER146 2.2 24.2 1.0
O A:HOH1054 2.2 30.4 1.0
OD1 A:ASP308 2.2 26.1 1.0
OD2 A:ASP304 2.2 18.1 1.0
OD2 A:ASP306 2.4 23.4 1.0
OD1 A:ASP306 2.4 24.7 1.0
CG A:ASP306 2.8 21.1 1.0
CG A:ASP308 3.2 23.8 1.0
CG A:ASP304 3.2 20.6 1.0
CB A:SER146 3.4 22.1 1.0
O A:HOH951 3.5 34.2 1.0
OD2 A:ASP308 3.6 24.6 1.0
OD1 A:ASP304 3.8 21.9 1.0
CA A:SER146 4.0 22.8 1.0
CG A:ARG309 4.1 22.7 1.0
NE A:ARG309 4.1 31.4 1.0
O A:HOH1137 4.2 47.8 1.0
CB A:ASP304 4.3 17.5 1.0
CB A:ASP306 4.3 19.2 1.0
CD A:ARG309 4.4 23.8 1.0
CB A:ASP308 4.5 22.2 1.0
N A:HIS147 4.6 21.3 1.0
O A:HOH1015 4.6 27.2 1.0
C A:SER146 4.7 22.5 1.0
N A:ASP308 4.8 21.1 1.0
N A:ARG309 4.9 21.7 1.0
CB A:ARG309 4.9 22.6 1.0
N A:ASP306 5.0 18.8 1.0

Magnesium binding site 2 out of 3 in 2fuv

Go back to Magnesium Binding Sites List in 2fuv
Magnesium binding site 2 out of 3 in the Phosphoglucomutase From Salmonella Typhimurium.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Phosphoglucomutase From Salmonella Typhimurium. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg902

b:14.6
occ:1.00
O B:HOH1219 2.1 30.4 1.0
OD2 B:ASP304 2.2 19.9 1.0
OG B:SER146 2.2 20.8 1.0
OD1 B:ASP308 2.2 26.0 1.0
OD2 B:ASP306 2.4 25.5 1.0
OD1 B:ASP306 2.4 26.4 1.0
CG B:ASP306 2.7 20.0 1.0
CG B:ASP304 3.2 20.8 1.0
CG B:ASP308 3.2 22.3 1.0
CB B:SER146 3.3 19.4 1.0
OD2 B:ASP308 3.6 25.3 1.0
O B:HOH977 3.6 32.9 1.0
OD1 B:ASP304 3.8 21.7 1.0
CD B:ARG309 3.8 25.3 1.0
CA B:SER146 4.0 19.2 1.0
CG B:ARG309 4.0 23.4 1.0
O B:HOH1153 4.2 38.8 1.0
CB B:ASP306 4.3 21.1 1.0
CB B:ASP304 4.3 19.1 1.0
CB B:ASP308 4.5 20.2 1.0
N B:HIS147 4.6 20.7 1.0
O B:HOH1002 4.6 21.9 1.0
C B:SER146 4.7 20.3 1.0
N B:ASP308 4.7 19.5 1.0
N B:ARG309 4.7 21.9 1.0
CB B:ARG309 4.8 22.2 1.0
NH1 B:ARG309 4.9 33.2 1.0
O B:HOH968 4.9 22.5 1.0
N B:ASP306 4.9 20.1 1.0
CA B:ASP308 5.0 20.8 1.0

Magnesium binding site 3 out of 3 in 2fuv

Go back to Magnesium Binding Sites List in 2fuv
Magnesium binding site 3 out of 3 in the Phosphoglucomutase From Salmonella Typhimurium.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Phosphoglucomutase From Salmonella Typhimurium. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg903

b:32.6
occ:1.00
O B:HOH1348 2.0 38.7 1.0
O B:HOH1313 2.1 32.0 1.0
O B:HOH1191 2.1 33.5 1.0
O B:HOH1314 2.1 36.0 1.0
O B:HOH1025 2.2 21.2 1.0
O B:HOH1062 2.3 30.3 1.0
O B:HOH1010 3.9 24.1 1.0
OD1 B:ASP378 3.9 24.0 1.0
OD2 B:ASP378 4.2 28.6 1.0
OD2 B:ASP166 4.3 30.3 1.0
O B:HOH997 4.3 26.5 1.0
CB B:ASP166 4.4 24.4 1.0
O B:HOH969 4.4 21.1 1.0
ND2 B:ASN161 4.5 17.1 1.0
O B:HOH1225 4.5 50.9 1.0
CG B:ASP378 4.5 25.5 1.0
CG B:ASP166 4.9 26.4 1.0
O B:HOH1134 5.0 43.8 1.0

Reference:

J.Osipiuk, R.Wu, D.Holzle, F.Collart, A.Joachimiak. X-Ray Crystal Structure of Phosphoglucomutase From Salmonella Typhimurium. To Be Published.
Page generated: Mon Dec 14 07:23:38 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy