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Magnesium in PDB 2g1a: Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase

Enzymatic activity of Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase

All present enzymatic activity of Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase:
3.1.3.2;

Protein crystallography data

The structure of Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase, PDB code: 2g1a was solved by R.Leone, V.Calderone, E.Cappelletti, M.Benvenuti, S.Mangani, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.70 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.914, 66.287, 91.841, 90.00, 121.06, 90.00
R / Rfree (%) 16 / 20.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase (pdb code 2g1a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase, PDB code: 2g1a:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2g1a

Go back to Magnesium Binding Sites List in 2g1a
Magnesium binding site 1 out of 2 in the Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg400

b:9.2
occ:1.00
O A:HOH760 2.0 3.7 1.0
OD2 A:ASP44 2.1 6.6 1.0
O A:HOH731 2.1 4.9 1.0
O A:ASP46 2.2 3.6 1.0
O A:HOH718 2.2 3.5 1.0
OD1 A:ASP167 2.2 2.2 1.0
CG A:ASP44 3.0 5.3 1.0
CG A:ASP167 3.1 2.0 1.0
OD1 A:ASP44 3.3 3.8 1.0
C A:ASP46 3.3 3.5 1.0
OD2 A:ASP167 3.5 2.5 1.0
CA A:ASP46 4.0 3.3 1.0
O34 A:5HG700 4.0 14.2 1.0
OG A:SER168 4.0 3.7 1.0
N A:ASP46 4.0 3.1 1.0
OG1 A:THR48 4.0 2.2 1.0
OD2 A:ASP171 4.1 5.9 1.0
O A:HOH766 4.2 6.5 1.0
CB A:ASP46 4.2 3.8 1.0
O26 A:5HG700 4.3 15.6 1.0
CB A:ASP44 4.4 3.8 1.0
N A:ASP47 4.4 2.9 1.0
CB A:ASP167 4.5 2.1 1.0
C24 A:5HG700 4.6 16.8 1.0
N A:ASP167 4.6 3.1 1.0
CB A:ASP47 4.7 3.6 1.0
O32 A:5HG700 4.7 9.1 1.0
N A:SER168 4.7 2.4 1.0
N A:THR48 4.8 3.5 1.0
C A:ASP47 4.8 3.6 1.0
CA A:ASP47 4.8 3.7 1.0
C A:ILE45 4.8 2.6 1.0
CB A:SER168 4.9 3.7 1.0
O A:HOH928 4.9 5.6 1.0
P30 A:5HG700 4.9 15.0 1.0
CB A:THR48 5.0 3.0 1.0

Magnesium binding site 2 out of 2 in 2g1a

Go back to Magnesium Binding Sites List in 2g1a
Magnesium binding site 2 out of 2 in the Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg401

b:6.7
occ:1.00
O B:HOH951 2.1 5.4 1.0
O B:HOH755 2.1 6.4 1.0
O B:ASP46 2.1 2.8 1.0
OD1 B:ASP167 2.1 4.0 1.0
OD2 B:ASP44 2.1 2.0 1.0
O B:HOH716 2.2 7.6 1.0
CG B:ASP44 3.1 3.3 1.0
CG B:ASP167 3.1 2.5 1.0
C B:ASP46 3.3 2.8 1.0
OD1 B:ASP44 3.3 2.1 1.0
OD2 B:ASP167 3.4 3.3 1.0
O34 B:5HG701 3.9 14.0 1.0
CA B:ASP46 3.9 2.7 1.0
OG B:SER168 3.9 4.6 1.0
N B:ASP46 4.0 2.9 1.0
OD2 B:ASP171 4.1 3.8 1.0
OG1 B:THR48 4.1 3.6 1.0
CB B:ASP46 4.1 3.7 1.0
O B:HOH735 4.2 7.6 1.0
O26 B:5HG701 4.3 17.0 1.0
N B:ASP47 4.4 3.6 1.0
CB B:ASP44 4.4 3.6 1.0
CB B:ASP167 4.4 3.2 1.0
CB B:ASP47 4.5 2.0 1.0
N B:ASP167 4.5 3.3 1.0
C24 B:5HG701 4.6 18.4 1.0
O32 B:5HG701 4.7 12.0 1.0
N B:SER168 4.7 3.3 1.0
CA B:ASP47 4.7 3.0 1.0
O B:HOH711 4.7 6.7 1.0
N B:THR48 4.8 2.7 1.0
C B:ASP47 4.8 3.0 1.0
CB B:SER168 4.8 3.7 1.0
C B:ILE45 4.8 2.6 1.0
P30 B:5HG701 4.8 11.4 1.0
CA B:ASP167 5.0 3.1 1.0
CB B:THR48 5.0 3.6 1.0

Reference:

R.Leone, V.Calderone, E.Cappelletti, M.Benvenuti, S.Mangani. Crystal Structure of the Complex Between Apha Class B Acid Phosphatase/Phosphotransferase To Be Published.
Page generated: Tue Aug 13 23:21:23 2024

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