Magnesium in PDB 2go7: Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution

The structure of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution, PDB code: 2go7 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.29 / 2.10
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	155.000, 155.000, 88.440, 90.00, 90.00, 120.00
R / Rfree (%)	17.1 / 20.9

The structure of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

14 atoms

The binding sites of Magnesium atom in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution (pdb code 2go7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution, PDB code: 2go7:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg207 b:27.2 occ:1.00 OD2 A:ASP9 1.9 30.5 1.0 O A:ASP11 2.0 30.4 1.0 O A:HOH215 2.0 25.0 1.0 OD1 A:ASP164 2.1 28.8 1.0 O A:HOH214 2.1 24.4 1.0 O A:HOH213 2.2 28.3 1.0 CG A:ASP9 2.9 29.0 1.0 CG A:ASP164 3.1 31.5 1.0 OD1 A:ASP9 3.2 26.3 1.0 C A:ASP11 3.2 28.9 1.0 OD2 A:ASP164 3.5 30.1 1.0 OG1 A:THR13 4.0 26.5 1.0 CA A:ASP11 4.1 30.4 1.0 CD A:ARG165 4.1 43.2 1.0 OD2 A:ASP168 4.2 27.0 1.0 N A:ASP11 4.2 30.1 1.0 N A:GLY12 4.2 27.8 1.0 CB A:ASP9 4.3 28.6 1.0 CA A:GLY12 4.4 26.2 1.0 O A:HOH301 4.4 40.6 1.0 CB A:ASP164 4.5 30.2 1.0 CB A:ASP11 4.5 28.4 1.0 CG A:ARG165 4.5 36.7 1.0 N A:ASP164 4.6 29.1 1.0 N A:THR13 4.6 25.8 1.0 O A:HOH317 4.6 20.2 1.0 C A:LEU10 4.7 29.8 1.0 C A:GLY12 4.7 28.4 1.0 O A:LEU10 4.9 30.1 1.0 CL A:CL212 4.9 27.5 1.0

Magnesium binding site 2 out of 4 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg207 b:25.5 occ:1.00 O B:HOH210 2.0 24.6 1.0 O B:HOH211 2.0 26.9 1.0 O B:HOH212 2.1 20.9 1.0 OD2 B:ASP9 2.1 29.0 1.0 OD1 B:ASP164 2.1 30.3 1.0 O B:ASP11 2.2 30.8 1.0 CG B:ASP164 3.1 28.3 1.0 CG B:ASP9 3.1 31.9 1.0 OD2 B:ASP164 3.3 29.8 1.0 C B:ASP11 3.4 27.7 1.0 OD1 B:ASP9 3.4 28.1 1.0 OD2 B:ASP168 3.9 29.7 1.0 CD B:ARG165 4.0 45.4 1.0 OG1 B:THR13 4.2 26.9 1.0 CA B:ASP11 4.2 28.6 1.0 N B:ASP11 4.3 29.4 1.0 N B:GLY12 4.3 29.5 1.0 CB B:ASP164 4.4 27.3 1.0 CB B:ASP9 4.4 26.1 1.0 CB B:ASP11 4.4 30.1 1.0 CG B:ARG165 4.5 37.2 1.0 CA B:GLY12 4.5 28.1 1.0 N B:ASP164 4.5 27.7 1.0 O B:HOH324 4.9 31.4 1.0 CG B:ASP168 4.9 29.6 1.0 C B:LEU10 4.9 28.8 1.0 CA B:ASP164 4.9 29.4 1.0 N B:THR13 4.9 30.5 1.0 C B:GLY12 4.9 30.7 1.0 N B:ARG165 4.9 30.8 1.0 CB B:ARG165 5.0 33.1 1.0

Magnesium binding site 3 out of 4 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg207 b:24.7 occ:1.00 O C:HOH213 1.9 20.8 1.0 O C:HOH212 2.1 19.7 1.0 OD2 C:ASP9 2.1 29.1 1.0 OD1 C:ASP164 2.1 27.2 1.0 O C:ASP11 2.1 31.2 1.0 O C:HOH214 2.1 21.1 1.0 CG C:ASP9 3.0 29.6 1.0 CG C:ASP164 3.0 33.2 1.0 C C:ASP11 3.3 31.1 1.0 OD1 C:ASP9 3.3 28.1 1.0 OD2 C:ASP164 3.3 30.2 1.0 OG1 C:THR13 4.1 25.4 1.0 CA C:ASP11 4.1 29.5 1.0 OD2 C:ASP168 4.1 31.5 1.0 CB C:ASP11 4.2 27.5 1.0 N C:ASP11 4.3 28.4 1.0 N C:GLY12 4.3 27.9 1.0 CB C:ASP9 4.4 29.3 1.0 CB C:ASP164 4.4 30.2 1.0 O C:HOH324 4.4 21.7 1.0 CD C:ARG165 4.5 43.5 1.0 CA C:GLY12 4.5 27.3 1.0 CG C:ARG165 4.5 37.1 1.0 N C:ASP164 4.6 28.2 1.0 C C:GLY12 4.8 28.1 1.0 NE C:ARG165 4.8 58.2 1.0 N C:THR13 4.8 27.7 1.0 C C:LEU10 4.8 27.3 1.0 CL C:CL211 4.9 34.8 1.0 CA C:ASP164 5.0 30.2 1.0

Magnesium binding site 4 out of 4 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg207 b:40.1 occ:1.00 O D:HOH212 1.9 30.2 1.0 O D:ASP11 2.0 27.7 1.0 OD2 D:ASP9 2.0 28.4 1.0 OD1 D:ASP164 2.1 29.1 1.0 O D:HOH213 2.2 30.5 1.0 O D:HOH211 2.3 41.1 1.0 CG D:ASP9 3.0 29.0 1.0 CG D:ASP164 3.2 27.9 1.0 C D:ASP11 3.2 28.8 1.0 OD1 D:ASP9 3.4 22.6 1.0 OD2 D:ASP164 3.5 28.4 1.0 OG1 D:THR13 4.0 23.9 1.0 CA D:ASP11 4.0 30.4 1.0 N D:ASP11 4.1 28.5 1.0 OD2 D:ASP168 4.2 30.7 1.0 N D:GLY12 4.2 28.9 1.0 CB D:ASP11 4.4 31.6 1.0 CA D:GLY12 4.4 28.3 1.0 CB D:ASP9 4.4 28.2 1.0 CB D:ASP164 4.5 29.9 1.0 N D:ASP164 4.6 28.2 1.0 C D:LEU10 4.7 28.6 1.0 N D:THR13 4.8 28.9 1.0 CD D:ARG165 4.8 45.0 1.0 C D:GLY12 4.8 28.7 1.0 O D:LEU10 4.9 29.3 1.0 CG D:ARG165 4.9 38.4 1.0 CB D:THR13 5.0 25.7 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.