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Magnesium in PDB 2gvr: Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution.

Protein crystallography data

The structure of Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution., PDB code: 2gvr was solved by M.P.H.Lee, G.N.Parkinson, S.Neidle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.124, 39.633, 65.728, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 28.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution. (pdb code 2gvr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution., PDB code: 2gvr:

Magnesium binding site 1 out of 1 in 2gvr

Go back to Magnesium Binding Sites List in 2gvr
Magnesium binding site 1 out of 1 in the Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg26

b:13.5
occ:1.00
O A:HOH102 2.1 11.9 1.0
O B:HOH101 2.1 12.8 1.0
O B:HOH100 2.1 13.6 1.0
O A:HOH101 2.1 11.1 1.0
O A:HOH100 2.1 17.2 1.0
O B:HOH99 2.1 17.4 1.0
O6 B:DG22 4.0 11.7 1.0
O B:HOH31 4.1 16.0 1.0
O A:HOH52 4.2 26.2 1.0
O B:HOH27 4.2 14.1 1.0
O A:HOH38 4.3 21.3 1.0
O A:HOH37 4.3 20.0 1.0
C5 A:DC1 4.3 11.4 1.0
N7 A:DG2 4.4 7.9 1.0
O6 A:DG2 4.5 9.6 1.0
O A:HOH35 4.5 17.1 1.0
C6 A:DC1 4.8 14.5 1.0

Reference:

S.Neidle, G.N.Parkinson, M.P.H.Lee. Crystal Structure of the Berenil-D(Cgcgaattcgcg)2 Complex at 1.65 A Resolution. To Be Published.
Page generated: Mon Dec 14 07:24:59 2020

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