Magnesium in PDB 2gyx: Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution.

The structure of Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution., PDB code: 2gyx was solved by M.P.H.Lee, S.Neidle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.86
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	24.380, 40.102, 65.627, 90.00, 90.00, 90.00
R / Rfree (%)	23 / 32.7

The binding sites of Magnesium atom in the Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution. (pdb code 2gyx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution., PDB code: 2gyx:

Magnesium binding site 1 out of 1 in the Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of DB884- D(Cgcgaattcgcg)2 Complex at 1.86 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg26 b:28.7 occ:1.00 O B:HOH65 2.1 30.2 1.0 O B:HOH66 2.1 24.6 1.0 O A:HOH65 2.1 20.2 1.0 O A:HOH67 2.1 29.3 1.0 O A:HOH66 2.1 30.6 1.0 O B:HOH64 2.1 18.5 1.0 O B:HOH40 3.9 35.0 1.0 O6 B:DG22 4.1 29.3 1.0 O A:HOH28 4.2 34.7 1.0 O A:HOH32 4.2 37.5 1.0 N7 A:DG2 4.3 20.2 1.0 O6 A:DG2 4.3 19.8 1.0 O A:HOH29 4.3 25.2 1.0 O A:HOH41 4.4 40.5 1.0 O B:HOH30 4.4 29.7 1.0 C5 A:DC1 4.4 21.4 1.0 C6 A:DC1 4.9 18.8 1.0 C6 A:DG2 5.0 13.0 1.0 C5 A:DG2 5.0 22.8 1.0

M.Munde, M.P.H.Lee, S.Neidle, R.Arafa, D.W.Boykin, Y.Liu, C.Bailly, W.D.Wilson. Induced Fit Conformational Changes of A "Reversed Amidine" Heterocycle: Optimized Interactions in A Dna Minor Groove Complex. J.Am.Chem.Soc. V. 129 5688 2007.
ISSN: ISSN 0002-7863
PubMed: 17425312
DOI: 10.1021/JA069003N