Magnesium in PDB 2h9s: Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System

The structure of Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System, PDB code: 2h9s was solved by M.Egli, P.S.Pallan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.75
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	38.940, 38.940, 133.850, 90.00, 90.00, 120.00
R / Rfree (%)	24 / 28

The binding sites of Magnesium atom in the Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System (pdb code 2h9s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System, PDB code: 2h9s:

Magnesium binding site 1 out of 1 in the Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg200 b:30.4 occ:0.50 O A:HOH204 2.0 28.2 0.5 O A:HOH203 2.1 27.7 0.5 O A:HOH202 2.1 24.9 0.5 O A:HOH201 2.1 20.0 0.0 OP1 A:XGU2 2.1 37.8 1.0 O A:HOH205 2.1 20.0 0.5 P A:XGU2 3.5 33.6 1.0 O6' A:XGU2 3.8 33.4 1.0 O A:HOH209 3.9 33.3 1.0 O A:HOH213 4.1 20.0 0.5 OP2 A:XGU2 4.3 30.2 1.0 C6' A:XCT1 4.5 34.9 1.0 O4' A:XCT1 4.6 31.9 1.0 C4' A:XCT1 4.9 35.5 1.0 O A:HOH225 4.9 50.5 1.0 OP1 A:XAD3 5.0 30.0 1.0

M.Egli, P.S.Pallan, R.Pattanayek, C.J.Wilds, P.Lubini, G.Minasov, M.Dobler, C.J.Leumann, A.Eschenmoser. Crystal Structure of Homo-Dna and Nature'S Choice of Pentose Over Hexose in the Genetic System. J.Am.Chem.Soc. V. 128 10847 2006.
ISSN: ISSN 0002-7863
PubMed: 16910680
DOI: 10.1021/JA062548X