The binding sites of Magnesium atom in the structure of Crystal Structure of Alpha-Amino-Beta-Carboxymuconate-Epsilon- Semialdehyde-Decarboxylase (Acmsd) (pdb code 2hbv). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom. The 2hbv structure was solved by D.MARTYNOWSKI, Y.EYOBO, T.LI, K.YANG, A.LIU, H.ZHANG, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A) | 33.8-1.6 | Space group | C121 | a (A) | 153.557 | b (A) | 48.107 | c (A) | 110.700 | alpha (°) | 90.00 | beta (°) | 127.31 | gamma (°) | 90.00 | Rfactor (%) | 21.1 | Rfree (%) | 25.1 |
|
Magnesium binding site 1 out of 1 in 2hbv
|  Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 2hbv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp152, A: Asp157, A: Hoh410, A: Hoh417, A: Hoh434, A: Hoh441, A: Hoh499, A: Hoh500, A: Hoh504, A: Hoh584, A: Hoh594, A: Hoh630, B: Hoh454, B: Hoh484, | conact list:
Atom | Atom | Distance (A) | Mg | O A:Asp152 | 4.34 | Mg | OD1 A:Asp152 | 4.74 | Mg | OD1 A:Asp157 | 4.07 | Mg | O A:Hoh410 | 4.38 | Mg | O A:Hoh417 | 3.74 | Mg | O A:Hoh434 | 1.91 | Mg | O A:Hoh441 | 2.14 | Mg | O A:Hoh499 | 2.00 | Mg | O A:Hoh500 | 2.08 | Mg | O A:Hoh504 | 2.02 | Mg | O A:Hoh584 | 2.08 | Mg | O A:Hoh594 | 4.36 | Mg | O A:Hoh630 | 4.06 | Mg | O B:Hoh454 | 4.18 | Mg | O B:Hoh484 | 4.18 |
| interactive model:
|
|