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Magnesium in PDB 2hiy: The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target)

Protein crystallography data

The structure of The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target), PDB code: 2hiy was solved by M.E.Cuff, M.Zhou, J.Abdullah, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.28 / 1.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.252, 108.845, 65.527, 90.00, 97.15, 90.00
R / Rfree (%) 16.3 / 19.4

Other elements in 2hiy:

The structure of The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target) also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target) (pdb code 2hiy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target), PDB code: 2hiy:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2hiy

Go back to Magnesium Binding Sites List in 2hiy
Magnesium binding site 1 out of 2 in the The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg7001

b:21.3
occ:1.00
O B:HOH7382 2.0 31.7 1.0
O B:HOH7375 2.1 23.4 1.0
O B:HOH7376 2.1 32.9 1.0
O B:HOH7057 4.1 19.5 1.0
O B:HOH7381 4.1 44.3 1.0
OG B:SER94 4.3 14.9 1.0
O B:HOH7188 4.3 30.9 1.0
O B:HOH7054 4.5 18.4 1.0
O B:HOH7176 4.6 27.7 1.0
CB B:SER94 4.6 15.7 1.0

Magnesium binding site 2 out of 2 in 2hiy

Go back to Magnesium Binding Sites List in 2hiy
Magnesium binding site 2 out of 2 in the The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg7002

b:25.1
occ:1.00
O D:HOH8398 1.9 32.7 1.0
O C:HOH7423 1.9 31.1 1.0
O D:HOH8396 2.1 31.1 1.0
O C:HOH7418 2.1 22.0 1.0
O D:HOH8399 2.2 33.6 1.0
O C:HOH7419 2.2 30.9 1.0
O D:HOH8313 4.0 43.0 1.0
OE2 C:GLU119 4.0 20.9 1.0
OD2 D:ASP96 4.1 27.5 1.0
OE1 C:GLU119 4.1 19.4 1.0
O C:HOH7380 4.1 56.2 1.0
O C:HOH7194 4.1 33.6 1.0
OD1 D:ASP96 4.2 27.4 1.0
O D:HOH8062 4.2 21.0 1.0
O D:HOH8110 4.2 28.1 1.0
CD C:GLU119 4.5 18.2 1.0
O C:HOH7037 4.5 18.7 1.0
CG D:ASP96 4.5 23.6 1.0
O D:HOH8259 4.9 48.8 1.0
CG2 C:ILE115 5.0 16.6 1.0

Reference:

M.E.Cuff, M.Zhou, J.Abdullah, A.Joachimiak. The Structure of Conserved Bacterial Protein SP0830 From Streptococcus Pneumoniae. (Casp Target) To Be Published.
Page generated: Tue Aug 13 23:53:27 2024

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