Magnesium in PDB 2j0s: The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution

The structure of The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution, PDB code: 2j0s was solved by F.Bono, J.Ebert, E.Lorentzen, E.Conti, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.73 / 2.21
Space group	P 64
Cell size a, b, c (Å), α, β, γ (°)	169.440, 169.440, 71.040, 90.00, 90.00, 120.00
R / Rfree (%)	18.5 / 21.6

The binding sites of Magnesium atom in the The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution (pdb code 2j0s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution, PDB code: 2j0s:

Magnesium binding site 1 out of 1 in the The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of the Exon Junction Complex at 2.2 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1412 b:30.8 occ:1.00 O A:HOH2051 2.0 28.9 1.0 O1B A:ANP1413 2.0 28.7 1.0 O1G A:ANP1413 2.0 34.8 1.0 OG1 A:THR89 2.1 43.6 1.0 O A:HOH2169 2.2 31.4 1.0 O A:HOH2049 2.2 24.4 1.0 CB A:THR89 3.2 44.3 1.0 PB A:ANP1413 3.3 31.1 1.0 PG A:ANP1413 3.3 34.0 1.0 N3B A:ANP1413 3.5 32.9 1.0 OD2 A:ASP187 3.7 45.0 1.0 O1A A:ANP1413 3.9 32.4 1.0 OE2 A:GLU188 3.9 50.1 1.0 N A:THR89 4.0 43.9 1.0 OD1 A:ASP187 4.0 48.4 1.0 O2G A:ANP1413 4.1 37.3 1.0 CA A:THR89 4.1 44.0 1.0 CA A:GLY340 4.2 44.7 1.0 O3A A:ANP1413 4.3 31.4 1.0 CG A:ASP187 4.3 46.1 1.0 CG2 A:THR89 4.3 44.0 1.0 O A:HOH2050 4.3 31.0 1.0 O3G A:ANP1413 4.4 35.5 1.0 O2B A:ANP1413 4.4 29.0 1.0 O A:GLY340 4.5 45.0 1.0 PA A:ANP1413 4.5 34.0 1.0 CB A:LYS88 4.7 44.3 1.0 CE A:LYS88 4.7 43.5 1.0 O2A A:ANP1413 4.8 32.0 1.0 C A:GLY340 4.9 45.0 1.0 C A:LYS88 4.9 44.1 1.0 CD A:GLU188 5.0 46.1 1.0

F.Bono, J.Ebert, E.Lorentzen, E.Conti. The Crystal Structure of the Exon Junction Complex Reveals How It Mantains A Stable Grip on Mrna Cell(Cambridge,Mass.) V. 126 713 2006.
ISSN: ISSN 0092-8674
PubMed: 16923391
DOI: 10.1016/J.CELL.2006.08.006