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Magnesium in PDB 2j1l: Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod

Enzymatic activity of Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod

All present enzymatic activity of Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod:
3.6.5.2;

Protein crystallography data

The structure of Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod, PDB code: 2j1l was solved by A.C.W.Pike, C.Johansson, C.Gileadi, F.H.Niesen, F.Sobott, G.Schoch, J.Elkins, C.Smee, F.Gorrec, S.Watt, J.Bray, A.P.Turnbull, F.Von Delft, C.Arrowsmith, A.Edwards, J.Weigelt, M.Sundstrom, D.Doyle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 66.811, 66.810, 103.921, 90.00, 90.00, 120.00
R / Rfree (%) 21.7 / 24.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod (pdb code 2j1l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod, PDB code: 2j1l:

Magnesium binding site 1 out of 1 in 2j1l

Go back to Magnesium Binding Sites List in 2j1l
Magnesium binding site 1 out of 1 in the Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1195

b:76.5
occ:1.00
O A:HOH2003 2.2 62.3 1.0
O1B A:GDP1194 2.2 71.9 1.0
O A:HOH2002 2.2 69.7 1.0
O A:HOH2004 2.2 73.2 1.0
OG1 A:THR31 2.4 61.3 1.0
O3B A:GDP1194 2.6 72.8 1.0
PB A:GDP1194 2.9 70.3 1.0
CB A:THR31 3.6 63.2 1.0
O2B A:GDP1194 3.8 71.6 1.0
O2A A:GDP1194 3.9 70.5 1.0
N A:THR31 4.1 62.9 1.0
O3A A:GDP1194 4.2 71.7 1.0
CA A:THR31 4.5 63.2 1.0
OD1 A:ASP71 4.5 61.2 1.0
NZ A:LYS30 4.5 60.5 1.0
OD2 A:ASP71 4.5 62.2 1.0
PA A:GDP1194 4.5 73.5 1.0
CG2 A:THR31 4.6 62.1 1.0
O1A A:GDP1194 4.8 70.5 1.0
CG A:ASP71 4.9 62.1 1.0
CB A:LYS30 5.0 61.9 1.0
CE A:LYS30 5.0 60.6 1.0

Reference:

A.C.W.Pike, C.Johansson, C.Gileadi, F.H.Niesen, F.Sobott, G.Schoch, J.Elkins, C.Smee, F.Gorrec, S.Watt, J.Bray, A.P.Turnbull, F.Von Delft, C.Arrowsmith, A.Edwards, J.Weigelt, M.Sundstrom, D.Doyle. Crystal Structure of Human Rho-Related Gtp-Binding Protein Rhod To Be Published.
Page generated: Sun Aug 10 11:44:07 2025

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