Magnesium in PDB 2j2c: Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II)

All present enzymatic activity of Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II):
3.1.3.5;

The structure of Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II), PDB code: 2j2c was solved by K.Wallden, P.Stenmark, C.Arrowsmith, H.Berglund, R.Busam, R.Collins, A.Edwards, M.Ehn, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, B.M.Hallberg, L.Holmberg Schiavone, M.Hogbom, T.Karlberg, T.Kotenyova, P.Loppnau, A.Magnusdottir, P.Nilsson-Ehle, T.Nyman, D.Ogg, C.Persson, J.Sagemark, M.Sundstrom, J.Uppenberg, A.G.Thorsell, S.Van Den Berg, J.Weigelt, M.Welin, P.Nordlund, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 2.2
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	91.465, 128.034, 130.415, 90.00, 90.00, 90.00
R / Rfree (%)	15.2 / 18.4

The binding sites of Magnesium atom in the Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II) (pdb code 2j2c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II), PDB code: 2j2c:

Magnesium binding site 1 out of 1 in the Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, Cn-II) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1496 b:6.2 occ:1.00 O A:HOH2443 2.1 3.5 1.0 O A:HOH2365 2.1 3.0 1.0 OD1 A:ASP351 2.1 3.0 1.0 OD2 A:ASP52 2.1 8.3 1.0 O A:HOH2369 2.2 2.0 1.0 O A:ASP54 2.2 3.2 1.0 CG A:ASP351 3.1 2.3 1.0 CG A:ASP52 3.1 4.2 1.0 OD2 A:ASP351 3.3 3.5 1.0 C A:ASP54 3.4 2.6 1.0 OD1 A:ASP52 3.6 3.3 1.0 O4 A:SO41491 4.0 15.8 1.0 CA A:ASP54 4.1 3.0 1.0 O1 A:SO41491 4.1 17.5 1.0 N A:ASP54 4.1 2.3 1.0 OG1 A:THR56 4.1 2.8 1.0 OD2 A:ASP356 4.2 2.8 1.0 O2 A:SO41491 4.2 15.3 1.0 CB A:ASP54 4.3 3.2 1.0 S A:SO41491 4.4 13.5 1.0 CB A:ASP52 4.4 2.0 1.0 N A:TYR55 4.4 2.3 1.0 CB A:ASP351 4.4 2.2 1.0 CB A:TYR55 4.5 2.4 1.0 O A:HOH2271 4.6 3.9 1.0 O A:HOH2064 4.6 2.0 1.0 N A:ASP351 4.7 3.5 1.0 CA A:TYR55 4.7 2.8 1.0 C A:TYR55 4.8 2.9 1.0 C A:MET53 4.8 2.0 1.0 N A:THR56 4.8 3.1 1.0 N A:HIS352 4.9 2.0 1.0

K.Wallden, P.Stenmark, T.Nyman, S.Flodin, S.Graslund, P.Loppnau, V.Bianchi, P.Nordlund. Crystal Structure of Human Cytosolic 5'- Nucleotidase II: Insights Into Allosteric Regulation and Substrate Recognition J.Biol.Chem. V. 282 17828 2007.
ISSN: ISSN 0021-9258
PubMed: 17405878
DOI: 10.1074/JBC.M700917200