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Magnesium in PDB 2j8d: X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
Protein crystallography data
The structure of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State, PDB code: 2j8d
was solved by
J.Koepke,
R.Diehm,
G.Fritzsch,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 119.52 / 2.07 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 140.010, 140.010, 184.760, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 19.7 / 21.8 |
Other elements in 2j8d:
The structure of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State also contains other interesting chemical elements:
| Iron | (Fe) | 1 atom |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
(pdb code 2j8d). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State, PDB code: 2j8d:
Jump to Magnesium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Magnesium where determined in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State, PDB code: 2j8d:
Jump to Magnesium binding site number: 1; 2; 3; 4;
Magnesium binding site 1 out of 4 in 2j8d
Go back to
Magnesium Binding Sites List in 2j8d
Magnesium binding site 1 out
of 4 in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State within 5.0Å range:
|
Magnesium binding site 2 out of 4 in 2j8d
Go back to
Magnesium Binding Sites List in 2j8d
Magnesium binding site 2 out
of 4 in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State within 5.0Å range:
|
Magnesium binding site 3 out of 4 in 2j8d
Go back to
Magnesium Binding Sites List in 2j8d
Magnesium binding site 3 out
of 4 in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State within 5.0Å range:
|
Magnesium binding site 4 out of 4 in 2j8d
Go back to
Magnesium Binding Sites List in 2j8d
Magnesium binding site 4 out
of 4 in the X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of X-Ray High Resolution Structure of the Photosynthetic Reaction Center From Rb. Sphaeroides at pH 8 in the Charge-Separated State within 5.0Å range:
|
Reference:
J.Koepke,
E.M.Krammer,
A.R.Klingen,
P.Sebban,
G.M.Ullmann,
G.Fritzsch.
pH Modulates the Quinone Position in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. V. 371 396 2007.
ISSN: ISSN 0022-2836
PubMed: 17570397
DOI: 10.1016/J.JMB.2007.04.082
Page generated: Wed Aug 14 00:39:54 2024
ISSN: ISSN 0022-2836
PubMed: 17570397
DOI: 10.1016/J.JMB.2007.04.082
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