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Magnesium in PDB 2jk1: Crystal Structure of the Wild-Type Hupr Receiver Domain

Protein crystallography data

The structure of Crystal Structure of the Wild-Type Hupr Receiver Domain, PDB code: 2jk1 was solved by K.M.Davies, E.D.Lowe, C.Venien-Bryan, L.N.Johnson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.23 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 89.931, 89.931, 53.874, 90.00, 90.00, 90.00
R / Rfree (%) 22.379 / 24.347

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Wild-Type Hupr Receiver Domain (pdb code 2jk1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Wild-Type Hupr Receiver Domain, PDB code: 2jk1:

Magnesium binding site 1 out of 1 in 2jk1

Go back to Magnesium Binding Sites List in 2jk1
Magnesium binding site 1 out of 1 in the Crystal Structure of the Wild-Type Hupr Receiver Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Wild-Type Hupr Receiver Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1144

b:54.6
occ:1.00
OD1 A:ASP13 2.0 52.1 1.0
OD2 A:ASP55 2.1 48.3 1.0
O A:ARG57 2.1 48.6 1.0
O A:HOH2002 2.2 51.5 1.0
CG A:ASP13 3.0 51.9 1.0
CG A:ASP55 3.2 42.8 1.0
OD2 A:ASP13 3.3 54.7 1.0
C A:ARG57 3.3 47.5 1.0
OD1 A:ASP55 3.8 46.5 1.0
OD1 A:ASP12 3.9 44.0 1.0
CG A:GLU14 4.1 57.2 1.0
N A:MET58 4.3 47.8 1.0
CB A:ASP55 4.3 44.0 1.0
CA A:ARG57 4.3 46.3 1.0
CG A:MET58 4.3 47.2 1.0
CD A:GLU14 4.4 64.2 1.0
CB A:ASP13 4.4 49.9 1.0
CA A:MET58 4.4 48.6 1.0
CB A:ARG57 4.4 46.1 1.0
N A:ARG57 4.5 44.2 1.0
OE2 A:GLU14 4.5 65.7 1.0
N A:ASP13 4.5 46.6 1.0
NZ A:LYS106 4.7 55.6 1.0
CA A:ASP13 4.9 49.2 1.0
CB A:MET58 5.0 48.5 1.0
N A:GLU14 5.0 51.1 1.0

Reference:

K.M.Davies, E.D.Lowe, C.Venien-Bryan, L.N.Johnson. The Hupr Receiver Domain Crystal Structure in Its Nonphospho and Inhibitory Phospho States. J.Mol.Biol. V. 385 51 2009.
ISSN: ISSN 0022-2836
PubMed: 18977359
DOI: 10.1016/J.JMB.2008.10.027
Page generated: Mon Dec 14 07:29:52 2020

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