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Magnesium in PDB 2jkg: Plasmodium Falciparum Profilin

Protein crystallography data

The structure of Plasmodium Falciparum Profilin, PDB code: 2jkg was solved by I.Kursula, P.Kursula, M.Ganter, S.Panjikar, K.Matuschewski, H.Schueler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.89
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.520, 49.700, 83.810, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 21.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Plasmodium Falciparum Profilin (pdb code 2jkg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Plasmodium Falciparum Profilin, PDB code: 2jkg:

Magnesium binding site 1 out of 1 in 2jkg

Go back to Magnesium Binding Sites List in 2jkg
Magnesium binding site 1 out of 1 in the Plasmodium Falciparum Profilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Plasmodium Falciparum Profilin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1170

b:18.9
occ:1.00
O A:PRO91 2.1 9.9 1.0
OD1 A:ASP92 3.1 22.1 1.0
C A:PRO91 3.3 12.1 1.0
CA A:ASP92 3.7 16.1 1.0
N A:ASP92 3.9 14.7 1.0
CG A:ASP92 4.0 19.0 1.0
CB A:ASP92 4.4 16.7 1.0
CA A:PRO91 4.4 10.4 1.0
O A:HOH2057 4.5 30.1 1.0
CE A:LYS73 4.6 32.6 1.0
C A:ASP92 4.8 15.0 1.0
O A:HOH2045 4.8 23.7 1.0
CB A:PRO91 4.9 11.4 1.0

Reference:

I.Kursula, P.Kursula, M.Ganter, S.Panjikar, K.Matuschewski, H.Schuler. Structural Basis For Parasite-Specific Functions of the Divergent Profilin of Plasmodium Falciparum. Structure V. 16 1638 2008.
ISSN: ISSN 0969-2126
PubMed: 19000816
DOI: 10.1016/J.STR.2008.09.008
Page generated: Mon Dec 14 07:29:54 2020

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