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Magnesium in PDB 2lcf: Solution Structure of Gppnhp-Bound H-RAST35S Mutant Protein

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Solution Structure of Gppnhp-Bound H-RAST35S Mutant Protein (pdb code 2lcf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Solution Structure of Gppnhp-Bound H-RAST35S Mutant Protein, PDB code: 2lcf:

Magnesium binding site 1 out of 1 in 2lcf

Go back to Magnesium Binding Sites List in 2lcf
Magnesium binding site 1 out of 1 in the Solution Structure of Gppnhp-Bound H-RAST35S Mutant Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Solution Structure of Gppnhp-Bound H-RAST35S Mutant Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg246

b:0.5
occ:1.00
H1 A:HOH264 2.0 3.4 1.0
O2G A:GNP219 2.0 73.3 1.0
O A:HOH264 2.2 23.1 1.0
O A:HOH252 2.2 74.3 1.0
O A:HOH258 2.2 24.1 1.0
O2B A:GNP219 2.3 41.5 1.0
OG A:SER17 2.3 53.4 1.0
H1 A:HOH258 2.3 71.3 1.0
H2 A:HOH252 2.3 64.3 1.0
H1 A:HOH252 2.4 32.3 1.0
HG A:SER17 2.6 13.1 1.0
H2 A:HOH258 2.8 73.4 1.0
H2 A:HOH264 2.8 73.4 1.0
N3B A:GNP219 3.0 64.1 1.0
PG A:GNP219 3.1 60.0 1.0
PB A:GNP219 3.2 2.4 1.0
HB2 A:SER35 3.3 21.2 1.0
CB A:SER17 3.5 51.5 1.0
HB2 A:SER17 3.7 15.2 1.0
HB3 A:SER17 3.8 12.4 1.0
HH A:TYR32 3.9 24.1 1.0
HNB3 A:GNP219 4.0 15.2 1.0
HD2 A:LYS16 4.1 1.2 1.0
OH A:TYR32 4.1 45.3 1.0
O3G A:GNP219 4.1 35.2 1.0
HE3 A:LYS16 4.1 52.5 1.0
H A:SER17 4.2 3.2 1.0
O1G A:GNP219 4.2 23.3 1.0
O3A A:GNP219 4.2 15.1 1.0
HA A:SER35 4.3 21.5 1.0
O A:GLY12 4.3 22.1 1.0
H A:GLY60 4.3 50.1 1.0
HZ2 A:LYS16 4.3 41.3 1.0
CB A:SER35 4.3 34.5 1.0
O1B A:GNP219 4.3 43.0 1.0
HA A:ALA59 4.3 23.4 1.0
O A:THR58 4.4 70.2 1.0
HA3 A:GLY60 4.6 55.1 1.0
N A:GLY60 4.6 62.2 1.0
H A:SER35 4.6 24.2 1.0
HA2 A:GLY12 4.7 15.4 1.0
CA A:SER17 4.7 22.1 1.0
CA A:SER35 4.7 22.3 1.0
N A:SER17 4.8 1.3 1.0
HB3 A:LYS16 4.8 14.4 1.0
HB3 A:SER35 4.8 63.3 1.0
CE A:LYS16 4.9 71.1 1.0
N A:SER35 4.9 14.1 1.0
CD A:LYS16 5.0 40.4 1.0

Reference:

M.Araki, F.Shima, Y.Yoshikawa, S.Muraoka, Y.Ijiri, Y.Nagahara, T.Shirono, T.Kataoka, A.Tamura. Solution Structure of the State 1 Conformer of Gtp-Bound H-Ras Protein and Distinct Dynamic Properties Between the State 1 and State 2 Conformers. J.Biol.Chem. V. 286 39644 2011.
ISSN: ESSN 1083-351X
PubMed: 21930707
DOI: 10.1074/JBC.M111.227074
Page generated: Mon Dec 14 07:30:23 2020

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