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Magnesium in PDB 2m32: Alpha-1 Integrin I-Domain in Complex with Glogen Triple Helical Peptide

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Alpha-1 Integrin I-Domain in Complex with Glogen Triple Helical Peptide (pdb code 2m32). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Alpha-1 Integrin I-Domain in Complex with Glogen Triple Helical Peptide, PDB code: 2m32:

Magnesium binding site 1 out of 1 in 2m32

Go back to Magnesium Binding Sites List in 2m32
Magnesium binding site 1 out of 1 in the Alpha-1 Integrin I-Domain in Complex with Glogen Triple Helical Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Alpha-1 Integrin I-Domain in Complex with Glogen Triple Helical Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:1.7
occ:1.00
OE2 C:GLU212 1.9 2.1 1.0
OG1 A:THR81 1.9 2.1 1.0
OE1 C:GLU212 1.9 1.9 1.0
OG A:SER15 1.9 1.4 1.0
OG A:SER13 2.0 2.6 1.0
CD C:GLU212 2.3 1.7 1.0
HG A:SER15 2.6 1.5 1.0
HG1 A:THR81 2.6 2.4 1.0
HG A:SER13 2.6 2.8 1.0
H A:SER15 2.9 2.4 1.0
CB A:SER13 3.0 2.7 1.0
HB2 A:SER13 3.0 0.0 1.0
CB A:THR81 3.1 2.4 1.0
CB A:SER15 3.1 1.5 1.0
HB A:THR81 3.1 0.0 1.0
HB3 A:SER15 3.1 0.0 1.0
HB3 A:SER13 3.5 0.0 1.0
H A:THR81 3.7 2.9 1.0
HG3 A:GLU116 3.7 0.0 1.0
N A:SER15 3.7 2.3 1.0
N A:THR81 3.7 3.1 1.0
CG C:GLU212 3.8 1.7 1.0
HB2 A:SER15 3.9 0.0 1.0
OD2 A:ASP114 3.9 1.8 1.0
OD1 A:ASP11 3.9 2.5 1.0
CA A:THR81 4.0 3.0 1.0
CA A:SER15 4.0 2.0 1.0
HG21 A:THR81 4.0 0.0 1.0
HG12 A:ILE16 4.1 0.0 1.0
CG2 A:THR81 4.1 2.4 1.0
HG3 C:GLU212 4.1 0.0 1.0
OD2 A:ASP11 4.1 3.1 1.0
OD1 B:ASN113 4.1 2.7 1.0
HA A:GLN80 4.1 0.0 1.0
HD22 B:ASN113 4.2 2.5 1.0
H A:ASN14 4.2 3.0 1.0
C A:GLN80 4.3 3.4 1.0
HG2 C:GLU212 4.3 0.0 1.0
CA A:SER13 4.3 3.3 1.0
OD1 A:ASP114 4.3 1.5 1.0
HB2 C:GLU212 4.4 0.0 1.0
CG A:ASP11 4.4 2.6 1.0
HA A:THR81 4.4 0.0 1.0
N A:ASN14 4.4 3.1 1.0
H A:SER13 4.4 3.2 1.0
C A:SER13 4.5 3.2 1.0
HG23 A:THR81 4.5 0.0 1.0
CG A:ASP114 4.5 1.3 1.0
H A:ILE16 4.7 2.8 1.0
CB C:GLU212 4.7 1.5 1.0
CG A:GLU116 4.8 2.6 1.0
C A:SER15 4.8 2.3 1.0
O A:GLN80 4.8 3.7 1.0
CA A:GLN80 4.8 3.5 1.0
HB3 A:GLU116 4.9 0.0 1.0
N A:SER13 4.9 3.5 1.0
HA A:SER15 4.9 0.0 1.0
C A:ASN14 4.9 2.8 1.0
HG3 A:GLN80 4.9 0.0 1.0
ND2 B:ASN113 5.0 2.1 1.0
CG B:ASN113 5.0 2.0 1.0

Reference:

Y.K.Chin, S.J.Headey, B.Mohanty, R.Patil, P.A.Mcewan, J.D.Swarbrick, T.D.Mulhern, J.Emsley, J.S.Simpson, M.J.Scanlon. The Structure of Integrin Alpha 1I Domain in Complex with A Collagen-Mimetic Peptide. J.Biol.Chem. V. 288 36796 2013.
ISSN: ISSN 0021-9258
PubMed: 24187131
DOI: 10.1074/JBC.M113.480251
Page generated: Mon Dec 14 07:30:35 2020

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