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Magnesium in PDB 2nn5: Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis

Protein crystallography data

The structure of Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis, PDB code: 2nn5 was solved by J.Osipiuk, R.Wu, S.Moy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.52 / 1.45
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 58.227, 69.030, 86.766, 90.00, 90.00, 90.00
R / Rfree (%) 15 / 19.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis (pdb code 2nn5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis, PDB code: 2nn5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2nn5

Go back to Magnesium Binding Sites List in 2nn5
Magnesium binding site 1 out of 2 in the Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg303

b:21.1
occ:0.90
OE2 A:GLU140 2.0 19.8 1.0
O A:HOH356 2.0 27.1 1.0
O A:HOH340 2.0 23.7 1.0
O A:HOH341 2.1 22.4 1.0
O A:HOH390 2.1 25.9 1.0
O1 A:EDO302 2.2 21.6 1.0
CD A:GLU140 3.0 22.6 1.0
C1 A:EDO302 3.3 27.2 1.0
OE1 A:GLU140 3.4 22.6 1.0
NE2 A:GLN130 4.0 25.0 1.0
OG1 A:THR-9 4.0 23.8 1.0
O A:HOH354 4.1 27.2 1.0
O A:ALA138 4.1 31.8 1.0
OE2 A:GLU-8 4.2 24.9 1.0
O2 A:EDO302 4.3 35.6 1.0
CG A:GLU140 4.4 23.6 1.0
C2 A:EDO302 4.4 30.9 1.0
CD A:GLU-8 4.5 23.0 1.0
CA A:GLU140 4.7 28.7 1.0
CG A:GLU-8 4.8 20.5 1.0
O A:PRO139 4.9 30.6 1.0

Magnesium binding site 2 out of 2 in 2nn5

Go back to Magnesium Binding Sites List in 2nn5
Magnesium binding site 2 out of 2 in the Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Conserved Protein of Unknown Function EF2215 From Enterococcus Faecalis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:21.2
occ:1.00
O A:HOH337 2.0 22.2 1.0
O A:HOH366 2.0 20.3 1.0
O A:HOH447 2.1 21.1 1.0
O A:HOH514 2.1 22.4 1.0
O A:HOH496 2.1 22.4 1.0
O A:HOH524 2.2 24.8 1.0
OE1 A:GLN25 4.0 17.2 1.0
O A:PRO95 4.2 21.1 1.0
OE2 A:GLU92 4.3 19.0 1.0
NE2 A:GLN25 4.3 26.7 1.0
OE1 A:GLU92 4.3 20.8 1.0
CD A:GLN25 4.5 20.6 1.0
O A:HOH442 4.6 36.4 1.0
CD A:GLU92 4.6 19.2 1.0
CA A:PRO95 4.6 20.5 1.0
CB A:PRO95 4.8 21.0 1.0
C A:PRO95 4.9 20.3 1.0

Reference:

J.Osipiuk, R.Wu, S.Moy, A.Joachimiak. X-Ray Crystal Structure of Conserved Hypothetical Protein EF_2215 From Enterococcus Faecalis. To Be Published.
Page generated: Wed Aug 14 00:53:15 2024

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