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Magnesium in PDB 2nt8: Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri

Enzymatic activity of Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri

All present enzymatic activity of Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri:
2.5.1.17;

Protein crystallography data

The structure of Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri, PDB code: 2nt8 was solved by M.St-Maurice, P.E.Mera, M.P.Taranto, F.Sesma, J.C.Escalante-Semerena, I.Rayment, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.68
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 110.609, 110.609, 110.609, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 20.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri (pdb code 2nt8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri, PDB code: 2nt8:

Magnesium binding site 1 out of 1 in 2nt8

Go back to Magnesium Binding Sites List in 2nt8
Magnesium binding site 1 out of 1 in the Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp Bound at the Active Site of A Pduo Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg998

b:15.5
occ:1.00
 O1A A:ATP999 2.0 15.4 1.0
O1B A:ATP999 2.0 14.0 1.0
O3G A:ATP999 2.1 14.6 1.0
O A:HOH1039 2.1 14.7 1.0
PB A:ATP999 3.1 16.4 1.0
PA A:ATP999 3.2 18.0 1.0
PG A:ATP999 3.3 19.1 1.0
O3B A:ATP999 3.5 18.3 1.0
O3A A:ATP999 3.5 16.8 1.0
NZ A:LYS23 3.8 15.2 1.0
O2G A:ATP999 4.0 17.4 1.0
O2A A:ATP999 4.2 20.6 1.0
O A:HOH1033 4.2 24.4 1.0
O5' A:ATP999 4.4 17.8 1.0
O1G A:ATP999 4.4 21.5 1.0
O2B A:ATP999 4.5 16.9 1.0
N7 A:ATP999 4.5 15.0 1.0
CE A:LYS23 4.7 15.6 1.0
C8 A:ATP999 4.8 15.1 1.0

Reference:

M.St Maurice, P.E.Mera, M.P.Taranto, F.Sesma, J.C.Escalante-Semerena, I.Rayment. Structural Characterization of the Active Site of the Pduo-Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri. J.Biol.Chem. V. 282 2596 2007.
ISSN: ISSN 0021-9258
PubMed: 17121823
DOI: 10.1074/JBC.M609557200
Page generated: Mon Dec 14 07:31:02 2020

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