Atomistry » Magnesium » PDB 2mtk-2o52 » 2o35
Atomistry »
  Magnesium »
    PDB 2mtk-2o52 »
      2o35 »

Magnesium in PDB 2o35: Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti

Protein crystallography data

The structure of Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti, PDB code: 2o35 was solved by Y.Kim, A.Joachimiak, E.Evdokimova, M.Kudritska, A.Edwards, A.Savchenko, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.07 / 2.12
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.994, 80.994, 64.708, 90.00, 90.00, 120.00
R / Rfree (%) 20.9 / 26.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti (pdb code 2o35). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti, PDB code: 2o35:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2o35

Go back to Magnesium Binding Sites List in 2o35
Magnesium binding site 1 out of 2 in the Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:43.4
occ:1.00
SG A:CYS45 2.3 56.5 1.0
SE A:MSE36 2.5 60.2 0.5
SG A:CYS42 2.6 52.8 1.0
N A:CYS42 3.5 51.5 1.0
CB A:CYS45 3.6 49.5 1.0
CB A:CYS42 3.7 51.2 1.0
CG A:MSE36 3.7 53.1 0.6
N A:CYS45 3.8 47.8 1.0
CG A:MSE36 3.9 51.5 0.4
C A:PHE41 4.0 52.2 1.0
CA A:CYS42 4.1 51.1 1.0
CA A:PHE41 4.1 52.7 1.0
CE A:MSE36 4.2 57.3 0.6
CA A:CYS45 4.2 49.4 1.0
CB A:MSE36 4.4 52.6 0.6
CB A:MSE36 4.5 51.6 0.4
C A:ASN44 4.7 48.6 1.0
C A:CYS42 4.7 50.3 1.0
O A:PHE41 4.8 51.2 1.0
SE A:MSE36 4.8 52.8 0.3
O A:CYS42 4.8 49.4 1.0
CB A:ASN44 4.9 48.6 1.0
N A:PHE41 5.0 54.8 1.0

Magnesium binding site 2 out of 2 in 2o35

Go back to Magnesium Binding Sites List in 2o35
Magnesium binding site 2 out of 2 in the Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg201

b:76.3
occ:1.00
SG B:CYS42 2.1 57.5 1.0
SG B:CYS45 2.4 59.0 1.0
OD1 B:ASN44 2.8 54.6 0.5
N B:CYS42 2.9 56.0 1.0
SE B:MSE36 3.0 78.2 0.7
CB B:CYS42 3.1 55.0 1.0
CG B:MSE36 3.2 69.5 1.0
C B:PHE41 3.4 57.0 1.0
CA B:CYS42 3.5 55.3 1.0
N B:CYS45 3.6 50.8 1.0
CB B:CYS45 3.7 50.1 1.0
CA B:PHE41 3.8 57.6 1.0
CG B:ASN44 3.9 53.2 0.5
C B:CYS42 4.1 54.1 1.0
O B:PHE41 4.1 56.7 1.0
CE B:MSE36 4.1 74.3 1.0
CA B:CYS45 4.2 50.4 1.0
O B:CYS42 4.2 54.3 1.0
CB B:ASN44 4.5 50.7 0.5
C B:ASN44 4.5 51.4 0.5
C B:ASN44 4.6 50.8 0.5
N B:ASN44 4.6 52.0 0.5
CB B:MSE36 4.6 66.3 1.0
N B:ASN44 4.7 51.4 0.5
N B:PHE41 4.7 58.5 1.0
CB B:ASN44 4.7 52.1 0.5
CA B:ASN44 4.8 51.0 0.5
CA B:ASN44 4.8 52.0 0.5
N B:ARG43 4.9 53.6 0.5
ND2 B:ASN44 4.9 53.4 0.5
CB B:PHE41 4.9 57.8 1.0
N B:ARG43 4.9 53.5 0.5

Reference:

Y.Kim, E.Evdokimova, M.Kudritska, A.Edwards, A.Savchenko, A.Joachimiak. The Crystal Structure of Protein of Unknown Function (DUF1244) From Sinorhizobium Meliloti To Be Published.
Page generated: Mon Dec 14 07:31:36 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy