Atomistry » Magnesium » PDB 2o56-2oh6 » 2o8c
Atomistry »
  Magnesium »
    PDB 2o56-2oh6 »
      2o8c »

Magnesium in PDB 2o8c: Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair

Protein crystallography data

The structure of Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair, PDB code: 2o8c was solved by J.J.Warren, T.J.Pohlhaus, A.Changela, P.L.Modrich, L.S.Beese, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.37
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 259.810, 259.810, 259.810, 90.00, 90.00, 90.00
R / Rfree (%) 25.6 / 29

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair (pdb code 2o8c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair, PDB code: 2o8c:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2o8c

Go back to Magnesium Binding Sites List in 2o8c
Magnesium binding site 1 out of 2 in the Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg935

b:73.5
occ:1.00
O1B A:ADP936 2.0 75.5 1.0
OG A:SER676 2.4 69.8 1.0
PB A:ADP936 3.3 75.7 1.0
CB A:SER676 3.5 70.0 1.0
O3B A:ADP936 3.7 75.5 1.0
O2B A:ADP936 4.2 75.5 1.0
O2A A:ADP936 4.2 75.1 1.0
OD2 A:ASP748 4.3 75.8 1.0
O3A A:ADP936 4.4 75.3 1.0
OD1 A:ASP748 4.4 75.7 1.0
N A:SER676 4.6 70.2 1.0
OE1 A:GLU749 4.6 76.7 1.0
CA A:SER676 4.6 69.9 1.0
PA A:ADP936 4.7 75.0 1.0
CG A:ASP748 4.8 75.6 1.0
O1A A:ADP936 4.8 74.7 1.0

Magnesium binding site 2 out of 2 in 2o8c

Go back to Magnesium Binding Sites List in 2o8c
Magnesium binding site 2 out of 2 in the Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human Mutsalpha (MSH2/MSH6) Bound to Adp and An O6-Methyl-Guanine T Mispair within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg102

b:58.4
occ:1.00
OG B:SER1141 2.3 70.6 1.0
O3B B:ADP202 2.6 83.3 1.0
O2B B:ADP202 3.1 83.3 1.0
PB B:ADP202 3.3 83.2 1.0
CB B:SER1141 3.7 70.8 1.0
OD2 B:ASP1213 3.8 71.6 1.0
OE2 B:GLU1214 3.9 72.6 1.0
O2A B:ADP202 4.0 83.2 1.0
OD1 B:ASN1136 4.1 73.3 1.0
OD1 B:ASP1213 4.2 71.6 1.0
N B:SER1141 4.3 71.1 1.0
O1B B:ADP202 4.4 83.3 1.0
CG B:ASP1213 4.5 71.4 1.0
CD B:GLU1214 4.5 72.4 1.0
CA B:SER1141 4.5 70.8 1.0
O3A B:ADP202 4.5 83.0 1.0
CE B:LYS1140 4.6 71.2 1.0
PA B:ADP202 4.7 83.0 1.0
NZ B:LYS1140 5.0 71.3 1.0

Reference:

J.J.Warren, T.J.Pohlhaus, A.Changela, R.R.Iyer, P.L.Modrich, L.S.Beese. Structure of the Human Mutsalpha Dna Lesion Recognition Complex. Mol.Cell V. 26 579 2007.
ISSN: ISSN 1097-2765
PubMed: 17531815
DOI: 10.1016/J.MOLCEL.2007.04.018
Page generated: Mon Dec 14 07:31:54 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy