Magnesium in PDB 2ocb: Crystal Structure of Human RAB9B in Complex with A Gtp Analogue

The structure of Crystal Structure of Human RAB9B in Complex with A Gtp Analogue, PDB code: 2ocb was solved by B.Hong, L.Shen, J.R.Walker, W.Tempel, R.Landry, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.05 / 2.20
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	70.430, 70.430, 97.715, 90.00, 90.00, 120.00
R / Rfree (%)	21.4 / 25.3

The binding sites of Magnesium atom in the Crystal Structure of Human RAB9B in Complex with A Gtp Analogue (pdb code 2ocb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human RAB9B in Complex with A Gtp Analogue, PDB code: 2ocb:

Magnesium binding site 1 out of 1 in the Crystal Structure of Human RAB9B in Complex with A Gtp Analogue


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human RAB9B in Complex with A Gtp Analogue within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:30.6 occ:1.00 O A:HOH303 2.1 33.7 1.0 O2B A:GNP201 2.1 20.3 1.0 OG A:SER21 2.1 29.2 1.0 O2G A:GNP201 2.2 30.2 1.0 OG1 A:THR39 2.2 31.5 1.0 O A:HOH302 2.3 22.5 1.0 CB A:THR39 3.2 30.7 1.0 PG A:GNP201 3.2 31.8 1.0 PB A:GNP201 3.2 32.7 1.0 CB A:SER21 3.2 32.8 1.0 N3B A:GNP201 3.3 34.2 1.0 N A:THR39 3.7 32.2 1.0 OD2 A:ASP62 3.8 32.2 1.0 O3G A:GNP201 4.0 35.9 1.0 CA A:THR39 4.0 32.3 1.0 N A:SER21 4.1 25.4 1.0 O2A A:GNP201 4.1 41.2 1.0 O3A A:GNP201 4.2 27.8 1.0 CA A:SER21 4.3 29.4 1.0 OD1 A:ASP62 4.3 29.5 1.0 O1B A:GNP201 4.3 26.8 1.0 O A:HOH319 4.3 35.1 1.0 CG2 A:THR39 4.4 23.9 1.0 PA A:GNP201 4.5 34.9 1.0 CG A:ASP62 4.5 27.8 1.0 O A:THR63 4.5 24.1 1.0 O1G A:GNP201 4.5 32.3 1.0 O A:PHE37 4.5 46.8 1.0 O1A A:GNP201 4.6 32.3 1.0 C A:HIS38 4.6 36.6 1.0 O A:HOH318 4.7 33.0 1.0 CA A:HIS38 5.0 39.4 1.0

B.Hong, L.Shen, J.R.Walker, W.Tempel, R.Landry, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park. Crystal Structure of Human RAB9B in Complex with A Gtp Analogue To Be Published.