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Magnesium in PDB 2ocz: The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes.

Enzymatic activity of The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes.

All present enzymatic activity of The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes.:
4.2.1.10;

Protein crystallography data

The structure of The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes., PDB code: 2ocz was solved by M.E.Cuff, E.Duggan, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.50 / 1.85
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.688, 81.688, 85.364, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 23

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes. (pdb code 2ocz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes., PDB code: 2ocz:

Magnesium binding site 1 out of 1 in 2ocz

Go back to Magnesium Binding Sites List in 2ocz
Magnesium binding site 1 out of 1 in the The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:24.5
occ:1.00
O A:HOH533 1.9 25.3 1.0
O A:HOH707 1.9 25.2 1.0
O A:HOH711 2.0 27.4 1.0
OD1 A:ASN89 2.0 39.8 1.0
O A:HOH505 2.1 24.9 1.0
O A:HOH552 2.2 28.1 1.0
CG A:ASN89 3.1 39.7 1.0
ND2 A:ASN89 3.5 37.6 1.0
O A:HOH515 4.0 26.2 1.0
O A:ASN85 4.3 38.1 1.0
OD1 A:ASN85 4.3 41.1 1.0
O A:HOH623 4.4 54.6 1.0
CB A:ASN89 4.4 38.5 1.0
ND2 A:ASN85 4.5 39.9 1.0
CG A:ASN85 4.8 39.7 1.0
CA A:ASN89 4.8 37.7 1.0

Reference:

M.E.Cuff, E.Duggan, S.Clancy, A.Joachimiak. The Structure of A Putative 3-Dehydroquinate Dehydratase From Streptococcus Pyogenes. To Be Published.
Page generated: Mon Dec 14 07:32:06 2020

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