Magnesium in PDB 2odb: The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6)

The structure of The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6), PDB code: 2odb was solved by E.Ugochukwu, X.Yang, J.Elkins, M.Soundararajan, A.C.W.Pike, J.Eswaran, N.Burgess, J.E.Debreczeni, M.Sundstrom, C.Arrowsmith, J.Weigelt, A.Edwards, O.Gileadi, F.Von Delft, S.Knapp, D.Doyle, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.59 / 2.40
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	162.366, 162.366, 45.968, 90.00, 90.00, 120.00
R / Rfree (%)	20.3 / 23.2

The structure of The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6) also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6) (pdb code 2odb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6), PDB code: 2odb:

Magnesium binding site 1 out of 1 in the The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg205 b:51.2 occ:1.00 O A:HOH207 1.8 38.1 1.0 OG1 A:THR17 1.9 60.3 1.0 OG1 A:THR35 2.0 56.5 1.0 O A:HOH209 2.0 41.8 1.0 O2B A:GCP200 2.1 44.1 1.0 O1G A:GCP200 2.1 41.9 1.0 CB A:THR35 3.1 57.3 1.0 CB A:THR17 3.1 59.2 1.0 PB A:GCP200 3.4 46.7 1.0 PG A:GCP200 3.5 43.6 1.0 C3B A:GCP200 3.7 45.1 1.0 N A:THR35 3.8 57.6 1.0 N A:THR17 3.8 59.3 1.0 OD2 A:ASP57 4.0 58.4 1.0 CA A:THR17 4.0 59.6 1.0 OD1 A:ASP57 4.1 55.3 1.0 CA A:THR35 4.1 57.3 1.0 O A:HOH229 4.1 51.2 1.0 O2A A:GCP200 4.1 50.0 1.0 CG2 A:THR35 4.2 57.3 1.0 CG2 A:THR17 4.2 59.5 1.0 CG A:ASP57 4.4 57.3 1.0 O3A A:GCP200 4.4 47.8 1.0 O2G A:GCP200 4.4 41.7 1.0 O A:VAL33 4.4 57.9 1.0 O1B A:GCP200 4.4 41.0 1.0 O3G A:GCP200 4.5 45.0 1.0 PA A:GCP200 4.5 52.0 1.0 O A:THR58 4.6 58.1 1.0 C A:PRO34 4.7 57.9 1.0 O1A A:GCP200 4.7 52.6 1.0 C A:LYS16 4.9 59.1 1.0 CA A:PRO34 4.9 58.2 1.0

X.Yang, E.Ugochukwu, J.Elkins, M.Soundararajan, J.Eswaran, A.C.W.Pike, N.Burgess, J.E.Debreczeni, O.Gileadi, S.Knapp, D.Doyle. The Crystal Structure of Human CDC42 in Complex with the Crib Domain of Human P21-Activated Kinase 6 (PAK6) To Be Published.