Magnesium in PDB 2ouv: Crystal Structure of PDE10A2 Mutant of D564N

All present enzymatic activity of Crystal Structure of PDE10A2 Mutant of D564N:
3.1.4.17;

The structure of Crystal Structure of PDE10A2 Mutant of D564N, PDB code: 2ouv was solved by H.C.Wang, Y.D.Liu, J.Hou, M.Y.Zheng, H.Robinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.56
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.441, 82.205, 155.242, 90.00, 90.00, 90.00
R / Rfree (%)	20.9 / 22.8

The structure of Crystal Structure of PDE10A2 Mutant of D564N also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of PDE10A2 Mutant of D564N (pdb code 2ouv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of PDE10A2 Mutant of D564N, PDB code: 2ouv:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of PDE10A2 Mutant of D564N


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of PDE10A2 Mutant of D564N within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg778 b:24.7 occ:1.00 ND2 A:ASN564 2.2 18.2 1.0 O A:HOH784 2.3 19.4 1.0 O A:HOH779 2.3 18.9 1.0 O A:HOH781 2.3 25.8 1.0 O A:HOH783 2.4 26.6 1.0 O A:HOH782 2.5 28.8 1.0 CG A:ASN564 3.1 15.8 1.0 OD1 A:ASN564 3.4 17.0 1.0 ZN A:ZN777 3.8 22.7 1.0 O A:HOH780 3.9 19.5 1.0 NE2 A:HIS595 4.0 11.4 1.0 OE2 A:GLU592 4.1 15.5 1.0 OG1 A:THR633 4.2 12.3 1.0 CD2 A:HIS595 4.2 11.2 1.0 O A:HOH785 4.3 19.1 1.0 O A:HIS563 4.3 13.3 1.0 CD2 A:HIS563 4.3 14.9 1.0 OD2 A:ASP674 4.5 17.1 1.0 CD2 A:HIS525 4.5 16.1 1.0 CB A:ASN564 4.5 14.8 1.0 O A:THR633 4.7 12.7 1.0 NE2 A:HIS563 4.7 16.4 1.0 CD2 A:HIS567 4.7 14.4 1.0 CB A:THR633 4.7 12.0 1.0 NE2 A:HIS525 4.7 16.7 1.0 CA A:ASN564 4.8 13.3 1.0 CG A:GLU592 4.9 13.8 1.0 CD A:GLU592 4.9 14.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of PDE10A2 Mutant of D564N


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of PDE10A2 Mutant of D564N within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg778 b:14.7 occ:1.00 ND2 B:ASN564 2.2 16.4 1.0 O B:HOH784 2.2 16.7 1.0 O B:HOH783 2.2 16.0 1.0 O B:HOH779 2.2 21.4 1.0 O B:HOH782 2.3 17.3 1.0 O B:HOH781 2.3 16.8 1.0 CG B:ASN564 3.2 18.0 1.0 OD1 B:ASN564 3.5 22.3 1.0 ZN B:ZN777 3.9 30.8 1.0 OE2 B:GLU592 3.9 17.9 1.0 OG1 B:THR633 4.0 15.6 1.0 O B:HOH780 4.0 24.2 1.0 NE2 B:HIS595 4.1 14.2 1.0 CD2 B:HIS563 4.1 19.3 1.0 O B:HIS563 4.2 15.3 1.0 O B:HOH867 4.2 32.8 1.0 CD2 B:HIS595 4.4 14.3 1.0 CD2 B:HIS567 4.4 16.6 1.0 O B:THR633 4.5 15.9 1.0 CB B:THR633 4.5 15.8 1.0 CB B:ASN564 4.6 16.9 1.0 NE2 B:HIS567 4.6 17.0 1.0 OD2 B:ASP674 4.6 20.8 1.0 NE2 B:HIS563 4.6 21.8 1.0 CA B:ASN564 4.8 16.0 1.0 CD B:GLU592 4.9 17.6 1.0 CG B:GLU592 4.9 17.1 1.0 C B:HIS563 5.0 15.7 1.0

H.Wang, Y.Liu, J.Hou, M.Zheng, H.Robinson, H.Ke. From the Cover: Structural Insight Into Substrate Specificity of Phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa V. 104 5782 2007.
ISSN: ISSN 0027-8424
PubMed: 17389385
DOI: 10.1073/PNAS.0700279104