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Magnesium in PDB 2oze: The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes

Protein crystallography data

The structure of The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes, PDB code: 2oze was solved by A.Cicek, W.Weihofen, W.Saenger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.50 / 1.83
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.968, 82.968, 233.998, 90.00, 90.00, 120.00
R / Rfree (%) 19.2 / 21.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes (pdb code 2oze). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes, PDB code: 2oze:

Magnesium binding site 1 out of 1 in 2oze

Go back to Magnesium Binding Sites List in 2oze
Magnesium binding site 1 out of 1 in the The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Delta Protein of PSM19035 From Streptoccocus Pyogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg299

b:15.8
occ:1.00
O2B A:AGS300 1.9 14.6 1.0
O A:HOH386 2.0 17.9 1.0
O3G A:AGS300 2.1 24.2 1.0
OG A:SER51 2.1 16.9 1.0
O A:HOH553 2.1 13.6 1.0
CB A:SER51 3.1 16.4 1.0
PB A:AGS300 3.1 17.7 1.0
PG A:AGS300 3.3 32.5 1.0
O3B A:AGS300 3.4 20.5 1.0
N A:SER51 3.8 17.2 1.0
CA A:SER51 4.0 17.0 1.0
O A:HOH323 4.0 25.1 1.0
OD2 A:ASP161 4.0 18.9 1.0
O1A A:AGS300 4.1 21.6 1.0
O A:HOH330 4.1 24.8 1.0
O A:HOH554 4.1 32.9 1.0
OD1 A:ASP161 4.2 18.6 1.0
O3A A:AGS300 4.2 19.3 1.0
O1B A:AGS300 4.3 17.3 1.0
O A:THR162 4.4 15.5 1.0
O2G A:AGS300 4.5 33.7 1.0
PA A:AGS300 4.5 20.2 1.0
O A:HOH454 4.5 15.9 1.0
OD2 A:ASP74 4.5 21.7 1.0
CG A:ASP161 4.5 17.2 1.0
S1G A:AGS300 4.6 44.0 1.0
CB A:THR78 4.7 17.3 1.0
CB A:LYS50 4.7 18.0 1.0
O2A A:AGS300 4.8 19.8 1.0
CG2 A:THR78 4.8 19.6 1.0
C A:LYS50 4.8 17.3 1.0

Reference:

F.Pratto, A.Cicek, W.A.Weihofen, R.Lurz, W.Saenger, J.C.Alonso. Streptococcus Pyogenes PSM19035 Requires Dynamic Assembly of Atp-Bound Para and Parb on Pars Dna During Plasmid Segregation. Nucleic Acids Res. V. 36 3676 2008.
ISSN: ISSN 0305-1048
PubMed: 18477635
DOI: 10.1093/NAR/GKN170
Page generated: Wed Aug 14 02:00:56 2024

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