Magnesium in PDB 2ozs: Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp

All present enzymatic activity of Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp:
2.7.7.7;

The structure of Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp, PDB code: 2ozs was solved by K.E.Zahn, H.Belrhali, S.S.Wallace, S.Doublie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	81.306, 117.754, 129.133, 90.00, 90.00, 90.00
R / Rfree (%)	21.6 / 27.2

The binding sites of Magnesium atom in the Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp (pdb code 2ozs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp, PDB code: 2ozs:

Magnesium binding site 1 out of 1 in the Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of RB69 GP43 in Complex with Dna with Datp Opposite Dtmp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg904 b:44.3 occ:1.00 O2B A:DTP905 1.8 40.9 1.0 O1G A:DTP905 1.9 39.5 1.0 OD2 A:ASP623 2.0 51.6 1.0 OD1 A:ASP411 2.2 48.5 1.0 O A:LEU412 2.2 49.2 1.0 O2A A:DTP905 2.2 39.2 1.0 PB A:DTP905 2.8 39.6 1.0 PG A:DTP905 3.1 39.9 1.0 CG A:ASP623 3.1 52.9 1.0 O3A A:DTP905 3.2 39.6 1.0 O3B A:DTP905 3.2 40.5 1.0 PA A:DTP905 3.3 38.3 1.0 CG A:ASP411 3.3 49.3 1.0 C A:LEU412 3.4 49.2 1.0 OD1 A:ASP623 3.7 54.7 1.0 OD2 A:ASP411 3.7 48.5 1.0 C5' A:DTP905 3.9 34.1 1.0 N A:LEU412 4.0 49.2 1.0 O5' A:DTP905 4.0 37.2 1.0 O2G A:DTP905 4.0 40.2 1.0 CA A:LEU412 4.1 49.0 1.0 N A:SER414 4.2 48.7 1.0 O1B A:DTP905 4.2 39.7 1.0 O3G A:DTP905 4.2 39.6 1.0 CB A:ASP623 4.3 52.7 1.0 N A:LEU415 4.4 47.5 1.0 N A:THR413 4.5 49.3 1.0 CB A:ASP411 4.6 49.7 1.0 O1A A:DTP905 4.6 36.0 1.0 CB A:LEU412 4.6 48.8 1.0 C A:THR413 4.6 49.0 1.0 C A:ASP411 4.7 49.7 1.0 CA A:THR413 4.7 49.5 1.0 CA A:SER414 4.7 48.5 1.0 CB A:LEU415 4.9 46.6 1.0 O3' A:DTP905 5.0 34.3 1.0

K.E.Zahn, H.Belrhali, S.S.Wallace, S.Doublie. Caught Bending the A-Rule: Crystal Structures of Translesion Dna Synthesis with A Non-Natural Nucleotide. Biochemistry V. 46 10551 2007.
ISSN: ISSN 0006-2960
PubMed: 17718515
DOI: 10.1021/BI7008807