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Magnesium in PDB 2p3p: Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83

Protein crystallography data

The structure of Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83, PDB code: 2p3p was solved by B.Nocek, C.Hatzos, S.Moy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.76
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.753, 48.259, 54.191, 86.55, 79.58, 68.35
R / Rfree (%) 16.5 / 22.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83 (pdb code 2p3p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83, PDB code: 2p3p:

Magnesium binding site 1 out of 1 in 2p3p

Go back to Magnesium Binding Sites List in 2p3p
Magnesium binding site 1 out of 1 in the Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:17.8
occ:1.00
O B:HOH956 2.0 16.5 1.0
OG B:SER206 2.1 7.1 1.0
O B:HOH798 2.1 21.1 1.0
O B:HOH957 2.1 20.4 1.0
O B:HOH958 2.1 24.7 1.0
O B:HOH959 2.2 22.7 1.0
CB B:SER206 3.1 10.1 1.0
CA B:SER206 3.8 9.7 1.0
O B:HOH976 4.1 31.1 1.0
O B:HOH734 4.1 20.3 1.0
O B:HOH741 4.2 18.4 1.0
OE2 B:GLU237 4.3 14.6 1.0
OE1 B:GLU237 4.4 11.4 1.0
N B:SER206 4.4 9.8 1.0
O B:HOH961 4.6 21.1 1.0
CD B:GLU237 4.8 13.1 1.0
O A:HOH511 4.9 24.2 1.0

Reference:

B.Nocek, C.Hatzos, S.Moy, A.Joachimiak. Structure of A Domain of An Uncharacterized Protein PG_1388 From Porphyromonas Gingivalis W83 To Be Published.
Page generated: Wed Aug 14 02:03:06 2024

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