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Magnesium in PDB 2p3s: Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R)

Enzymatic activity of Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R)

All present enzymatic activity of Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R):
2.7.4.3;

Protein crystallography data

The structure of Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R), PDB code: 2p3s was solved by R.Counago, C.J.Wilson, J.Myers, G.Wu, Y.Shamoo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.95 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.000, 45.522, 100.158, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 23.9

Other elements in 2p3s:

The structure of Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R) also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R) (pdb code 2p3s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R), PDB code: 2p3s:

Magnesium binding site 1 out of 1 in 2p3s

Go back to Magnesium Binding Sites List in 2p3s
Magnesium binding site 1 out of 1 in the Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg323

b:3.4
occ:1.00
 O A:HOH454 2.3 18.7 1.0
O2G A:AP5318 2.4 15.1 1.0
O2B A:AP5318 2.5 12.5 1.0
O A:HOH564 2.8 43.2 1.0
PG A:AP5318 3.6 16.3 1.0
PB A:AP5318 3.6 15.6 1.0
O3B A:AP5318 3.9 16.6 1.0
O3G A:AP5318 4.0 15.5 1.0
O A:HOH346 4.1 16.1 1.0
O1E A:AP5318 4.2 15.3 1.0
N A:GLY14 4.2 15.2 1.0
CA A:GLY14 4.3 13.5 1.0
O A:HOH344 4.4 18.7 1.0
OD2 A:ASP84 4.4 17.0 1.0
NH2 A:ARG160 4.4 9.9 1.0
O2A A:AP5318 4.4 14.4 1.0
OD1 A:ASP84 4.4 15.1 1.0
O A:HOH436 4.5 39.1 1.0
O3A A:AP5318 4.5 15.7 1.0
NH2 A:ARG127 4.5 13.4 1.0
OG A:SER30 4.7 9.2 1.0
O1B A:AP5318 4.7 15.0 1.0
O2E A:AP5318 4.7 13.2 1.0
O1G A:AP5318 4.7 14.1 1.0
PE A:AP5318 4.8 15.8 1.0
CG A:ASP84 4.8 16.4 1.0
NH2 A:ARG36 4.8 15.8 1.0
PA A:AP5318 4.9 15.2 1.0
OD1 A:ASP33 5.0 16.2 1.0

Reference:

R.Counago, C.J.Wilson, J.Myers, G.Wu, Y.Shamoo, P.Wittung-Stafshede. Crystal Structure of A Thermostable Mutant of Bacillus Subtilis Adenylate Kinase (G214R/Q199R) To Be Published.
Page generated: Mon Dec 14 07:34:06 2020

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