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Magnesium in PDB 2p7v: Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4

Protein crystallography data

The structure of Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4, PDB code: 2p7v was solved by G.A.Patikoglou, L.F.Westblade, E.A.Campbell, V.Lamour, W.J.Lane, S.A.Darst, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.60
Space group P 64
Cell size a, b, c (Å), α, β, γ (°) 84.111, 84.111, 84.219, 90.00, 90.00, 120.00
R / Rfree (%) 23.9 / 27.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4 (pdb code 2p7v). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4, PDB code: 2p7v:

Magnesium binding site 1 out of 1 in 2p7v

Go back to Magnesium Binding Sites List in 2p7v
Magnesium binding site 1 out of 1 in the Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Escherichia Coli Regulator of Sigma 70, Rsd, in Complex with Sigma 70 Domain 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg101

b:21.2
occ:0.50
O B:HOH1 1.9 33.7 1.0
O B:GLU605 2.4 23.9 1.0
O B:ARG608 2.6 25.8 1.0
C B:ARG608 3.4 24.9 1.0
C B:GLU605 3.6 25.1 1.0
N B:SER609 4.1 25.1 1.0
CA B:SER609 4.1 26.1 1.0
N B:ARG608 4.2 24.5 1.0
CA B:ARG608 4.2 24.6 1.0
N B:PHE610 4.4 31.2 1.0
CA B:GLU605 4.5 26.3 1.0
N B:VAL606 4.5 25.9 1.0
C B:SER609 4.5 28.7 1.0
CA B:VAL606 4.6 25.2 1.0
OE2 B:GLU605 4.6 34.6 1.0
CB B:ARG608 4.6 22.6 1.0
CB B:GLU605 4.7 27.4 1.0
C B:VAL606 4.7 24.7 1.0
O B:VAL606 5.0 25.7 1.0

Reference:

G.A.Patikoglou, L.F.Westblade, E.A.Campbell, V.Lamour, W.J.Lane, S.A.Darst. Crystal Structure of the Escherichia Coli Regulator of SIGMA70, Rsd, in Complex with SIGMA70 Domain 4. J.Mol.Biol. V. 372 649 2007.
ISSN: ISSN 0022-2836
PubMed: 17681541
DOI: 10.1016/J.JMB.2007.06.081
Page generated: Wed Aug 14 02:04:24 2024

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